Gene Information

Name : EC042_2238A (EC042_2238A)
Accession : YP_006096547.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2330288 - 2330494 bp
Length : 207 bp
Strand : +
Note : -

DNA sequence : 
ATGCTCACCCCAGTTTCACTGATGGATGACCAGATGGTCGACATGGCATTTATCACTCAACTGACCGGCCTGACCGATAA
GTGGTTTTACAAACTCATCAAGGATGGTGACTTTCCTGCGCCCATCAAAATGGGCCGCAGCTCCCGATGGCTGAAAAGCG
AAGTGGAAGCCTGGCTGCAGGCGCGTATTGCACAGTCCCGTCCGTAA

Protein sequence : 
MLTPVSLMDDQMVDMAFITQLTGLTDKWFYKLIKDGDFPAPIKMGRSSRWLKSEVEAWLQARIAQSRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43835.1 hypothetical protein Not tested LEE Protein 9e-27 99
unnamed ADD91712.1 putative transcriptional regulator AlpA Not tested PAI-I AL862 Protein 9e-27 99
unnamed CAE85187.1 hypothetical protein Not tested PAI V 536 Protein 7e-26 96
ECO103_3577 YP_003223438.1 transcriptional regulator Not tested LEE Protein 2e-25 95
S3190 NP_838473.1 hypothetical protein Not tested SHI-1 Protein 4e-25 92
SF2987 NP_708761.1 hypothetical protein Not tested SHI-1 Protein 4e-25 92
rox AAR97599.1 regulator of excision Not tested SHI-1 Protein 3e-25 92
unnamed AAL08466.1 unknown Not tested SRL Protein 3e-25 92
Z1627 NP_287131.1 hypothetical protein Not tested TAI Protein 1e-14 68
Z1188 NP_286723.1 hypothetical protein Not tested TAI Protein 1e-14 68
c5192 NP_757040.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-17 68
unnamed CAD33739.1 hypothetical protein Not tested PAI I 536 Protein 9e-18 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_2238A YP_006096547.1 hypothetical protein VFG0651 Protein 1e-25 92
EC042_2238A YP_006096547.1 hypothetical protein VFG1057 Protein 1e-25 92
EC042_2238A YP_006096547.1 hypothetical protein VFG1480 Protein 4e-18 68