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Name : EC042_0215 (EC042_0215) Accession : YP_006094548.1 Strain : Escherichia coli 042 Genome accession: NC_017626 Putative virulence/resistance : Virulence Product : putative type VI secretion system protein Function : - COG functional category : - COG ID : - EC number : - Position : 251129 - 253861 bp Length : 2733 bp Strand : - Note : - DNA sequence : ATGATCCAGATTGATTTAGCCACGCTGGTAAAGCGGCTTAACCCCTTTGCAAAACAGGCGCTGGAAATGGCTGCCTCGGA GTGTATGAGCCAGCAGGCCAGTGAGATCACCGTTGCCCATATGCTGTTGCAGATGCTGGTTATCCCGCGCAGCGACGTAA GGGTGATTGCCGAACGCACAGGCATCAGTGCGGAGGATTTACGCCAGGCGCTGACCGTGGAGAGTTATCCCGGCGGACGT TCCGCCGAAGGCTATCCCAGCTTCTCCCCGATGCTGATCGAATGGCTCAAGGAGTCATGGCTGCTGGCCTCAGCCCAGAT GCAGCACAGCGAACTGCGCAGCGGCGTCCTGCTGCTTACTCTGCTGCATTCACCGCTGCGCTATATTCCACCCGCTGCTG CCCGTCTGCTGACGGCCATAAACCGTGACCAGTTACAGCAGGATTTCACCGCATGGACAAAAGAATCCGCCGAATCCGTG GATCTGGCTGGTGGGCAAGCGTTCCGTGCAACAGAAACCGGCGACACCCTGCTTGCCCGCTATGCCAAAAATATGACCGA AGACGCCCGTAACGGAAAACTCGATCCGGTACTGTGCCGCGACCACGAAATCGATTTGATGATCGACATTCTCTGCCGCC GTCGTAAAAATAACCCGGTGGTAGTGGGCGAAGCGGGCGTGGGCAAAAGCGCACTGATTGAAGGGCTGGCGCTGCGCATC GTGGCAGGCCAGGTGCCGGACAAGCTGAAAAACACCGATATCATGACCCTTGACCTGGGCGCATTGCAGGCCGGAGCGTC GGTGAAGGGCGAATTCGAAAAACGTTTCAAAGGGCTGATGGCGGAGGTCATTTCCTCCCCGGTGCCGATCATTCTGTTTA TCGACGAAGCGCATACCCTGATTGGCGCGGGCAACCAGCAGGGCGGGCTGGATATCTCCAACCTGCTCAAACCGGCGCTG GCGCGTGGCGAACTGAAAACCATCGCCGCCACAACCTGGAGCGAATACAAAAAATACTTCGAAAAAGACGCTGCCTTATC GCGCCGCTTCCAGTTAGTTAAGGTCAGCGAACCTAACGCTGCCGAAGCGACGATTATTCTGCGTGGCCTGTCGGCGGTCT ATGAACAGTCTCACGGTGTGCTGATTGACGATGAGGCCTTACAAGCCGCAGCAACACTGAGCGAGCGTTATCTCTCCGGA CGTCAGTTGCCGGACAAAGCGATTGATGTGCTGGACACCGCCTGCGCCCGCGTGGCAATCAACCTTTCTTCGCCGCCGAA ACAGATTTCGGCGCTGGCCACGTTAAGCCAGCAGCAGGAGACGGAAATCCGCCAGCTTGAGCGCGAAAGGCGTATCGGGC TGCGTACCGATACCGCCCGGATGACGGAAGTGCTGGTGCAGTACGATGAAACACTGACGGCGCTGGATGAACTGGAAGCC GCCTGGCACCAGCAACAGGCGCTGGTACAGGAGATTATTACGCTACGCCAGCAGTTACTGGGCGTTGCAGAGGACACAGA TGCCGTAGTGGATACGCCGCCAGAGTCAGAACAGGATAATACTGGTGCCATACCGGCTGATGAAGCTGGCAGCGTACAGC CGGAAGAGACCGCTGAAACAGTTTCCCCGGTACAGCGGCTGGCACAGCTTACTGCCGAACTGGACGCCCTGCATAACGAT CGGTTGCTGGTCTCTCCGCATGTCGATAAAAAACAGATTGCGGCGGTAATTGCCGAATGGACTGGTGTTCCGCTTAACCG CCTGTCGCAGAATGAAATGTCGGTCATCACCGACCTGCCGAAGTGGCTTGGTGACACCATCAAAGGCCAGGACCTGGCGA TTGCCAGCCTGCATAAACACCTGCTGACCGCACGCGCCGACCTGCGCCGTCCGGGACGCCCGCTTGGCGCGTTTCTGCTG GCTGGTCCCAGTGGCGTGGGTAAAACCGAAACCGTCCTGCAACTGGCAGAGCTGCTCTACGGCGGTCGCCAGTACCTGAC CACCATCAATATGTCCGAGTTCCAGGAGAAGCACACCGTCTCGCGGCTGATTGGTTCCCCTCCGGGCTATGTCGGCTATG GCGAAGGCGGCGTGCTGACTGAGGCCATCCGCCAGAAACCCTACTCGGTGGTACTTCTCGATGAAGTGGAAAAAGCGCAC CCGGATGTGCTCAACCTGTTCTACCAGGCGTTTGACAAGGGCGAGATGGCGGACGGCGAGGGCCGCCTGATTGACTGTAA AAACATCGTCTTCTTCCTCACCTCCAACCTCGGCTATCAGGTGATTGTCGAACACGCCGATGACCCGGAAACCATGCAGG AAGCCCTGTATCCGGTGCTGGCAGACTTCTTTAAACCCGCCCTGCTGGCGCGTATGGAAGTGGTGCCATACCTGCCGCTG TCGAAAGCGACGCTCGCTACCATTATTGCCGGGAAACTGGCCCGCCTGGATAACGTGCTGCGCAGCCGCTTTGGTGCGGA CGTGATTATTGAACCGGAAGTGACGGACGAAATCATGAGCCGCGTCACCCGCGCGGAAAACGGCGCGAGGATGCTCGAAT CGGTCATTGACGGCGACATGCTGCCGCCGCTCTCGCTGCTGCTGTTGCAGAAAATGGCGGCTAACACGGCGATTGCCCGG ATTCGCCTGTCGGTGGCAGACGGTGCATTCACAGCAGACGTGGAAGATGTTCTGAACGACGAGTCCGTCACAGAGGATGA AACGGTTTTATGA Protein sequence : MIQIDLATLVKRLNPFAKQALEMAASECMSQQASEITVAHMLLQMLVIPRSDVRVIAERTGISAEDLRQALTVESYPGGR SAEGYPSFSPMLIEWLKESWLLASAQMQHSELRSGVLLLTLLHSPLRYIPPAAARLLTAINRDQLQQDFTAWTKESAESV DLAGGQAFRATETGDTLLARYAKNMTEDARNGKLDPVLCRDHEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLALRI VAGQVPDKLKNTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVISSPVPIILFIDEAHTLIGAGNQQGGLDISNLLKPAL ARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPNAAEATIILRGLSAVYEQSHGVLIDDEALQAAATLSERYLSG RQLPDKAIDVLDTACARVAINLSSPPKQISALATLSQQQETEIRQLERERRIGLRTDTARMTEVLVQYDETLTALDELEA AWHQQQALVQEIITLRQQLLGVAEDTDAVVDTPPESEQDNTGAIPADEAGSVQPEETAETVSPVQRLAQLTAELDALHND RLLVSPHVDKKQIAAVIAEWTGVPLNRLSQNEMSVITDLPKWLGDTIKGQDLAIASLHKHLLTARADLRRPGRPLGAFLL AGPSGVGKTETVLQLAELLYGGRQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAH PDVLNLFYQAFDKGEMADGEGRLIDCKNIVFFLTSNLGYQVIVEHADDPETMQEALYPVLADFFKPALLARMEVVPYLPL SKATLATIIAGKLARLDNVLRSRFGADVIIEPEVTDEIMSRVTRAENGARMLESVIDGDMLPPLSLLLLQKMAANTAIAR IRLSVADGAFTADVEDVLNDESVTEDETVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 0.0 | 95 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 0.0 | 95 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-126 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EC042_0215 | YP_006094548.1 | putative type VI secretion system protein | VFG2084 | Protein | 0.0 | 57 |
| EC042_0215 | YP_006094548.1 | putative type VI secretion system protein | VFG2076 | Protein | 2e-145 | 43 |
