Gene Information

Name : EC042_2125 (EC042_2125)
Accession : YP_006096431.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2210368 - 2211087 bp
Length : 720 bp
Strand : -
Note : -

DNA sequence :
ATGAACCAGGCTGTTTCTATAACATATGATTTATGGCATATTATTTTCATGAAGATTCTACTTATTGAAGATAATCAAAG
GACCCAGGAATGGGTAACGCAGGGGCTTTCCGAAGCGGGTTATGTCATTGATGCCGTTTCAGATGGCAGAGATGGGCTTT
ATCTTGCGCTGAAGGATGATTATGCATTGATCATTCTGGATATTATGCTTCCGGGTATGGATGGCTGGCAGATCTTACAA
ACGTTAAGAACAGCAAAGCAAACCCCTGTTATTTGCCTTACTGCAAGGGATTCTGTCGATGACAGAGTCAGAGGGCTGGA
CAGTGGGGCAAATGATTATCTGGTAAAACCTTTTTCATTTTCTGAGTTGCTGGCAAGGGTTCGGGCACAATTAAGGCAAC
ATCACGCTCTGAATTCATCATTAGAAATCAGCGGCTTAAGAATGGACTCTGTCAGTCAAAGTGTGAGCAGGGACAATATC
AGTATTACACTGACGCGCAAGGAGTTTCAGTTACTTTGGTTACTGGCCTCCAGAGCTGGCGAGATTATCCCCAGAACGGT
TATTGCGAGTGAAATTTGGGGAATCAACTTTGATAGTGATACCAATACGGTGGACGTCGCCATTCGCAGGCTCCGCGCAA
AAGTTGATGATCCTTTTCCTGAAAAGCTAATCTCCACAATCCGGGGGATGGGCTATTCATTCGTAGCGGTAAAAAAATAA

Protein sequence :
MNQAVSITYDLWHIIFMKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQILQ
TLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQLRQHHALNSSLEISGLRMDSVSQSVSRDNI
SITLTRKEFQLLWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLISTIRGMGYSFVAVKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-80 77
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-82 74

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_2125 YP_006096431.1 two-component response regulator BAC0125 Protein 7e-59 57
EC042_2125 YP_006096431.1 two-component response regulator BAC0197 Protein 7e-56 55
EC042_2125 YP_006096431.1 two-component response regulator BAC0083 Protein 3e-54 54
EC042_2125 YP_006096431.1 two-component response regulator BAC0111 Protein 1e-55 52
EC042_2125 YP_006096431.1 two-component response regulator BAC0308 Protein 6e-52 52
EC042_2125 YP_006096431.1 two-component response regulator BAC0638 Protein 6e-49 52
EC042_2125 YP_006096431.1 two-component response regulator BAC0347 Protein 5e-50 49
EC042_2125 YP_006096431.1 two-component response regulator NC_002951.3238224.p0 Protein 3e-38 42
EC042_2125 YP_006096431.1 two-component response regulator NC_007793.3914065.p0 Protein 3e-38 42
EC042_2125 YP_006096431.1 two-component response regulator NC_002758.1121390.p0 Protein 3e-38 42
EC042_2125 YP_006096431.1 two-component response regulator NC_010079.5776364.p0 Protein 3e-38 42
EC042_2125 YP_006096431.1 two-component response regulator NC_002952.2859858.p0 Protein 3e-38 42
EC042_2125 YP_006096431.1 two-component response regulator NC_007622.3794948.p0 Protein 3e-38 42
EC042_2125 YP_006096431.1 two-component response regulator AE015929.1.gene1106. Protein 4e-33 42
EC042_2125 YP_006096431.1 two-component response regulator NC_003923.1003417.p0 Protein 3e-38 42
EC042_2125 YP_006096431.1 two-component response regulator NC_013450.8614146.p0 Protein 3e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_2125 YP_006096431.1 two-component response regulator VFG0596 Protein 7e-81 77