Gene Information

Name : EC042_0140 (EC042_0140)
Accession : YP_006094473.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 161500 - 162231 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence : 
TTGTTAAATAAAAAGAATATTGTCGCATTATGTGTTGCCAGTAGTATGGCATTTAGTATGCCTGTTATGGCTGATATTGT
TATTTCCGGTACACGCGTCATTTATAAAAGTGATCAAAAAAGCGTTAGCGTACGCCTGGAGAATAAAGGCAATAGCCATC
TGTTAGTACAAAGCTGGCTGGATACCGGTGACGATAACGCTGAGCCGGGAAGCATTAATGTACCATTTACGGCAACACCT
CCCGTTTCACGTATTGATGCTAAACGCGGTCAAACCATCAAATTGATGTATACCGGCAGCACCGTACTCCCCAGCGACAA
AGAAAGCGTATTCTGGTTTAACGTGCTGGAAGTGCCCCCAAAACCAGATGCTTCAAAAGTAGAGAATCAGAGCCTGTTAC
AACTGGCTTTCCGTACCCGTATCAAGCTGTTCTATCGTCCGGCAGGATTAAACGGTAACCCGTCTGAAGCACCATTAGCC
CTGAAATGGAAATGGGCTGAAGGGAAGTCTGGCCTGAGTGTATATAACCCAACACCTTATTACGTCTCTTTCAACAGTGC
AGAGTTAATCGCTGGCGGTAAGTCGAACCCGCTCAATGTAAAAATGGTTGCACCGAAAAGCGAAGAGATTTTCACCATAA
GCGGTTCAGGCGGGAAAGCAACGTCAGGAAAGGTACATTTCTCCGCGATTAATGATTTTGGCGGCGCAATTGAAGGCGAT
GTCAATTTGTAA

Protein sequence : 
MLNKKNIVALCVASSMAFSMPVMADIVISGTRVIYKSDQKSVSVRLENKGNSHLLVQSWLDTGDDNAEPGSINVPFTATP
PVSRIDAKRGQTIKLMYTGSTVLPSDKESVFWFNVLEVPPKPDASKVENQSLLQLAFRTRIKLFYRPAGLNGNPSEAPLA
LKWKWAEGKSGLSVYNPTPYYVSFNSAELIAGGKSNPLNVKMVAPKSEEIFTISGSGGKATSGKVHFSAINDFGGAIEGD
VNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 1e-62 61
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 1e-40 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC042_0140 YP_006094473.1 fimbrial chaperone protein VFG1145 Protein 4e-39 43
EC042_0140 YP_006094473.1 fimbrial chaperone protein VFG1468 Protein 6e-41 43
EC042_0140 YP_006094473.1 fimbrial chaperone protein VFG0007 Protein 1e-41 41