Gene Information

Name : lolD (EC042_1187)
Accession : YP_006095498.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 1269057 - 1269758 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTACTGCACAA
TGTCAGTTTCAGCGTCGGCGAAGGTGAAATGATGGCGATCGTCGGTAGCTCTGGTTCCGGTAAAAGTACCTTGCTGCACC
TGCTGGGCGGGCTGGATACACCAACCTCCGGCGATGTGATCTTTAACGGTCAACCGATGAGCAAACTGTCTTCGGCGGCG
AAAGCAGAACTGCGCAACCAGAAGCTGGGCTTTATTTATCAGTTTCACCACCTGCTGCCGGATTTTACTGCCCTGGAAAA
CGTGGCTATGCCAATGCTGATTGGCAAGAAAAAGCCCGCTGAAATCAACAGCCGTGCGCTGGAGATGTTAAAAGCGGTGG
GGCTGGAGCATCGTGCGAATCACCGCCCATCTGAACTTTCTGGTGGCGAACGCCAGCGTGTGGCGATTGCCCGTGCGCTG
GTCAATAACCCGCGTCTGGTACTGGCGGATGAACCTACCGGTAACCTTGATGCGCGTAACGCCGACAGCATCTTCCAGTT
GCTTGGGGAGTTGAATCGCTTGCAGGGCACCGCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCC
GTCAACTGGAAATGCGTGATGGACGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAA

Protein sequence : 
MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAA
KAELRNQKLGFIYQFHHLLPDFTALENVAMPMLIGKKKPAEINSRALEMLKAVGLEHRANHRPSELSGGERQRVAIARAL
VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_006095498.1 lipoprotein-releasing system ATP-binding protein NC_008702.1.4606598. Protein 4e-37 48
lolD YP_006095498.1 lipoprotein-releasing system ATP-binding protein NC_012469.1.7686878. Protein 6e-41 45
lolD YP_006095498.1 lipoprotein-releasing system ATP-binding protein CP001581.1.gene798.p Protein 5e-37 41