Gene Information

Name : EcDH1_0727 (EcDH1_0727)
Accession : YP_006090700.1
Strain : Escherichia coli DH1
Genome accession: NC_017625
Putative virulence/resistance : Virulence
Product : general secretion pathway protein L
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 771793 - 772635 bp
Length : 843 bp
Strand : +
Note : TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: sbc:SbBS512_E3404 general secretion pathway protein GspL

DNA sequence : 
ATGCGCAACATTGCGCAGTGGTTGCAGGAAAACGGCATCACCCGCGCTACCGTCGCGCCGGACTGGATGTCCATTCCTTG
TGGGTTTATGGCTTGCGATGCGCAACGGGTTATCTGCCGCATCGATGAATGCCGGGGATGGAGCGCCGGGCTGGCGCTGG
CTCCGGTCATGTTCCGCGCCCAGCTCAATGAGCAGGATTTACCGCTTTCGCTAACCGTAGTCGGCATTGCACCGGAAAAG
CTATCAGCATGGGCTGGCGCAGACGCTGAACGCCTGACCGTTACAGCTCTGCCCGCCATTACCACTTATGGCGAACCGGA
AGGGAACCTGCTGACAGGGCCGTGGCAGCCTCGCGTCAGCTACCGAAAACAGTGGGCGCGCTGGCGGGTGATGATTCTGC
CGATATTGCTGATTCTGGTTGCGCTGGCAGTGGAGCGGGGCGTGACGTTATGGAGCGTCAGCGAACAGGTGGCGCAAAGC
CGCACCCAGGCGGAGGAACAGTTCTTAACGTTGTTCCCGGAGCAGAAGCGGATTGTGAATTTACGCTCTCAGGTGACGAT
GGCGCTGAAAAAATATCGCCCACAGGCCGACGATACCCGGCTGCTCGCCGAGTTGTCAGCGATAGCCAGCACCCTGAAAT
CAGCGTCACTTTCCGACATCGAAATGCGTGGTTTTACCTTTGATCAAAAACGCCAGATACTTCACCTCCAGCTACGGGCC
GCGAACTTTGCCAGTTTCGACAAACTGCGTAGTGTACTGGCAACCGATTATGTTGTGCAACAGGACGCGTTACAGAAAGA
GGGTGATGCGGTTTCCGGCGGCGTAACGTTGCGGAGGAAATAA

Protein sequence : 
MRNIAQWLQENGITRATVAPDWMSIPCGFMACDAQRVICRIDECRGWSAGLALAPVMFRAQLNEQDLPLSLTVVGIAPEK
LSAWAGADAERLTVTALPAITTYGEPEGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALAVERGVTLWSVSEQVAQS
RTQAEEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKSASLSDIEMRGFTFDQKRQILHLQLRA
ANFASFDKLRSVLATDYVVQQDALQKEGDAVSGGVTLRRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspL CAE85226.1 GspL, hypotehtical type II secretion protein Not tested PAI V 536 Protein 1e-114 97
gspL YP_854399.2 GspL-like protein Not tested PAI I APEC-O1 Protein 2e-114 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcDH1_0727 YP_006090700.1 general secretion pathway protein L VFG2055 Protein 7e-114 97