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Name : EcDH1_0726 (EcDH1_0726) Accession : YP_006090699.1 Strain : Escherichia coli DH1 Genome accession: NC_017625 Putative virulence/resistance : Virulence Product : general secretion pathway protein C Function : - COG functional category : - COG ID : - EC number : - Position : 770855 - 771709 bp Length : 855 bp Strand : + Note : TIGRFAM: general secretion pathway protein C; KEGG: sdy:SDY_3092 putative type II secretion protein GspC DNA sequence : ATGCTGCTTATTATTTCTGCAAAAATGGCGCATTCACTCTGGCGCTATATCTCCTTTTCTGCGGAATATACGGCGGTTTC TCAACCGGTGAATAAACCGAGCCGTGTGGATGCAAAAACGTTCGATAAAAATGACGTGCAATTAATCAGCCAGCAAAACT GGTTTGGCAAATATCAGCCTGTCGCCGCGCAGGTAAAACAACCCGAACCTGTGCCTGTGGCAGAAACGCGTCTTAATGTG GTGCTGCGTGGGATCGCCTTTGGTGCCAGACCCGGCGCGGTTATTGAAGAAGGCGGTAAACAGCAGGTCTATTTGCAGGG TGAAACGCTTGGCTCTCACAACGCGGTGATTGAGGAAATCAACCGCGACCATGTGATGCTGCGTTATCAGGGAAAAATAG AGCGTCTGAGTCTGGCAGAAGAGGAACGTTCCACTGTTGCTGTGACCAACAAAAAAGCCGTCAGTGACGAAGCAAAGCAA GCTGTTGCTGAGCCTGCTGTCAGTGTGCCAGTTGAGATCCCGGCTGCCGTGCGTCAGGCACTGGCGAAAGATCCGCAGAA AATTTTTAACTATATCCAGCTTACGCCTGTGCGTAAGGAGGGGATTGTCGGTTATGCAGCGAAGCCGGGGGCAGATCGTT CTCTGTTCGATGCCAGCGGTTTCAAGGAAGGCGATATCGCCATTGCGCTAAATCAGCAGGATTTCACTGATCCACGAGCA ATGATTGCTCTGATGCGGCAGTTACCTTCAATGGATTCCATTCAACTTACGGTTTTACGCAAGGGTGCGCGCCACGACAT TTCCATCGCGCTGCGCTACCGACTATTCTGCCCGCCTTACTGGAAGAAGAGCTGA Protein sequence : MLLIISAKMAHSLWRYISFSAEYTAVSQPVNKPSRVDAKTFDKNDVQLISQQNWFGKYQPVAAQVKQPEPVPVAETRLNV VLRGIAFGARPGAVIEEGGKQQVYLQGETLGSHNAVIEEINRDHVMLRYQGKIERLSLAEEERSTVAVTNKKAVSDEAKQ AVAEPAVSVPVEIPAAVRQALAKDPQKIFNYIQLTPVRKEGIVGYAAKPGADRSLFDASGFKEGDIAIALNQQDFTDPRA MIALMRQLPSMDSIQLTVLRKGARHDISIALRYRLFCPPYWKKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspC | CAE85235.1 | GspC, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-109 | 95 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcDH1_0726 | YP_006090699.1 | general secretion pathway protein C | VFG2046 | Protein | 2e-108 | 93 |
