Gene Information

Name : EcDH1_0675 (EcDH1_0675)
Accession : YP_006090650.1
Strain : Escherichia coli DH1
Genome accession: NC_017625
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 713276 - 713935 bp
Length : 660 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ssn:SSON_3164 DNA-binding response regulator in two-component regulatory system with QseC

DNA sequence : 
ATGCGAATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGT
CGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCT
TACCAGGCATGGATGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCG
CGCGATGCGCTGGCGGAACGTGTAGAAGGGCTGCGTCTGGGAGCTGACGATTATCTGTGTAAACCTTTTGCGTTGATAGA
AGTCGCCGCCAGGCTGGAAGCTCTGATGCGCCGAACCAACGGCCAGGCCAGCAACGAGCTGCGCCACGGTAACGTCATGC
TCGACCCCGGCAAACGTATCGCCACGCTGGCTGGCGAACCCTTAACACTGAAACCAAAAGAATTTGCCCTGCTGGAATTA
CTGATGCGTAACGCTGGTCGGGTACTGTCGCGCAAACTGATTGAAGAGAAACTGTATACCTGGGACGAAGAGGTCACCAG
TAATGCCGTTGAAGTGCATGTGCATCATCTGCGACGCAAACTCGGTAGTGATTTTATTCGTACCGTGCATGGTATTGGTT
ACACATTAGGTGAGAAATGA

Protein sequence : 
MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGQREPVLILTA
RDALAERVEGLRLGADDYLCKPFALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLAGEPLTLKPKEFALLEL
LMRNAGRVLSRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-40 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcDH1_0675 YP_006090650.1 winged helix family two component transcriptional regulator BAC0487 Protein 5e-40 44
EcDH1_0675 YP_006090650.1 winged helix family two component transcriptional regulator BAC0083 Protein 8e-37 43
EcDH1_0675 YP_006090650.1 winged helix family two component transcriptional regulator BAC0638 Protein 2e-30 43
EcDH1_0675 YP_006090650.1 winged helix family two component transcriptional regulator BAC0347 Protein 3e-33 42
EcDH1_0675 YP_006090650.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 8e-31 41
EcDH1_0675 YP_006090650.1 winged helix family two component transcriptional regulator BAC0308 Protein 8e-36 41
EcDH1_0675 YP_006090650.1 winged helix family two component transcriptional regulator BAC0197 Protein 1e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcDH1_0675 YP_006090650.1 winged helix family two component transcriptional regulator VFG0473 Protein 2e-40 47
EcDH1_0675 YP_006090650.1 winged helix family two component transcriptional regulator VFG1390 Protein 1e-32 42