Gene Information

Name : EcDH1_3462 (EcDH1_3462)
Accession : YP_006093366.1
Strain : Escherichia coli DH1
Genome accession: NC_017625
Putative virulence/resistance : Virulence
Product : Pili assembly chaperone, N-terminal
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3715176 - 3715916 bp
Length : 741 bp
Strand : +
Note : PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: sbo:SBO_0126 putative chaperone protein EcpD

DNA sequence : 
ATGTTTTTTAACACCAAACATACAACAGCTTTATGCTTCGTAACCTGTATGGCTTTTAGTTCATCGTCTATTGCGGACAT
TGTCATTTCGGGTACTCGCGTAATATATAAAAGCGATCAAAAAAGTGTCAACGCACGTCTGGAAAATAAAGGGAATAACC
CGTTGCTTGTCCAGAGTTGGTTAGATACTGGCGATGACAACGCTGAGCCTGGCAGTATTACAGTCCCTTTTACTGCTACG
CCGCCAGTATCGCGTATTGATGCCAAACGTGGGCAAACAATCAAATTAATGTACACAGCCAGCACCTCACTGCCTAAAGA
CAGAGAGAGCGTGTTCTGGTTTAACGTACTGGAAGTTCCACCAAAACCAGATGCAGAAAAGGTCGCGAATCAAAGCCTGC
TGCAACTGGCATTTCGCACACGTATAAAACTTTTCTATCGCCCGGATGGATTGAAGGGAAATCCCTCTGAAGCCCCGTTA
GCCCTGAAGTGGTTCTGGTCAGGTTCAGAAGGTAAGGCGTCATTACGAGTGACCAATCCAACCCCTTACTACGTCTCTTT
TAGCAGTGGTGATTTAGAAGCTAGCGGTAAACGCTATCCGATTGATGTGAAAATGATTGCACCATTTAGTGATGAGGTCA
TGAAAGTCAATGGCCTTAATGGCAAAGCGAATTCTGCAAAAGTGCATTTTTACGCCATTAATGACTTTGGTGGCGCAATT
GAAGGTAATGCCAGGCTGTAA

Protein sequence : 
MFFNTKHTTALCFVTCMAFSSSSIADIVISGTRVIYKSDQKSVNARLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTAT
PPVSRIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL
ALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDVKMIAPFSDEVMKVNGLNGKANSAKVHFYAINDFGGAI
EGNARL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 4e-63 60
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 5e-41 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcDH1_3462 YP_006093366.1 Pili assembly chaperone, N-terminal VFG1145 Protein 9e-39 43
EcDH1_3462 YP_006093366.1 Pili assembly chaperone, N-terminal VFG1468 Protein 3e-41 42
EcDH1_3462 YP_006093366.1 Pili assembly chaperone, N-terminal VFG0007 Protein 6e-41 41