Gene Information

Name : EcDH1_3354 (EcDH1_3354)
Accession : YP_006093263.1
Strain : Escherichia coli DH1
Genome accession: NC_017625
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3604149 - 3604970 bp
Length : 822 bp
Strand : +
Note : PFAM: protein of unknown function DUF932; KEGG: ypy:YPK_3134 hypothetical protein

DNA sequence :
ATGACCCGTCTGGCTTCGCGCTTTGGCGCAGCAAACCTTATCCGTCGCGACCGTCCGTTAACCCGTGAAGAGCTGTTTCG
CGTAGTGCCCAGTGTATTCAGTGAGGACAAACACGAGTCCCGTAGTGAGCGTTATACCTATATACCCACCATCTCCCTGC
TCGACAGCCTACAGCGAGAAGGCTTCCAGCCATTCTTTGCCTGTCAGACCCGCGTGCGTGACCCGGGTCGTCGTGAACAT
ACAAAGCATATGCTGCGTCTGCGGCGGGAAGGGCAGATCACCGGTAAACAGGTGCCGGAAATTATTCTACTCAACTCTCA
CGATGGAACCAGTTCGTATCAGATGTTGCCGGGACTATTTCGTGCGGTTTGTCAGAACGGGCTCGTCTGCGGTGAGTCGT
TTGGCGAGGTGCGGGTGCCACACAAGGGGGACGTGGTGAGTCAGGTGATTGAAGGCGCGTATGAGGTGCTGGGGATTTTT
GACCGGGTGGAGGAGAAACGGGATGCCATGCAGTCGTTGCTGTTGCCACCCCCGGCACAGCAGGCACTGGCAAAAGCCGC
CCTCACATACCGCTTTGGTGAAGACCACCAGCCGGTGACTGAATCGCAGATCCTCTCCCCTCGCCGCTGGCAGGATGAGA
GCAATGACCTGTGGACCACGTACCAGCGTATTCAGGAGAACCTGATTAAGGGCGGGCTCAGTGGCCGTAATGCCAAAGGA
GGACGGTCACATACCCGTGCCGTTCGCGGTATCGACGGGGACGTGAAACTTAACCGGGCACTGTGGGTGATGGCGGAAGC
CCTGCTCACGCAACTGCAGTGA

Protein sequence :
MTRLASRFGAANLIRRDRPLTREELFRVVPSVFSEDKHESRSERYTYIPTISLLDSLQREGFQPFFACQTRVRDPGRREH
TKHMLRLRREGQITGKQVPEIILLNSHDGTSSYQMLPGLFRAVCQNGLVCGESFGEVRVPHKGDVVSQVIEGAYEVLGIF
DRVEEKRDAMQSLLLPPPAQQALAKAALTYRFGEDHQPVTESQILSPRRWQDESNDLWTTYQRIQENLIKGGLSGRNAKG
GRSHTRAVRGIDGDVKLNRALWVMAEALLTQLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-93 76
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-93 76
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 1e-93 76
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 1e-93 76
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 1e-93 76
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 8e-93 75
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-93 75
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 5e-93 75
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 8e-93 75
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 6e-92 74
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 3e-93 74
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 3e-94 74
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 3e-94 74
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 3e-94 74
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-94 74
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-73 58
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 5e-75 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcDH1_3354 YP_006093263.1 hypothetical protein VFG0658 Protein 4e-93 75
EcDH1_3354 YP_006093263.1 hypothetical protein VFG1676 Protein 3e-92 74
EcDH1_3354 YP_006093263.1 hypothetical protein VFG1615 Protein 2e-93 74
EcDH1_3354 YP_006093263.1 hypothetical protein VFG1526 Protein 2e-94 74