Gene Information

Name : EcDH1_3339 (EcDH1_3339)
Accession : YP_006093250.1
Strain : Escherichia coli DH1
Genome accession: NC_017625
Putative virulence/resistance : Virulence
Product : YagBYeeUYfjZ family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3591419 - 3591769 bp
Length : 351 bp
Strand : +
Note : PFAM: YagBYeeUYfjZ family protein; KEGG: spe:Spro_1771 hypothetical protein

DNA sequence :
ATGAATAAAGACTCTACTCAAACTTGGGGGCTTAAACGAGATATCACACCGTGTTTCGGAGCACGACTGGTGCAGGAAGG
TCATCGTCTGCATTTTCTGGCTGACCGGGCTGGATTCACCGGCTCATTCAGTGAGGTGCAGACTCTACAACTGGATGAAG
CCTTCCCGCATTTTGTCGCACATCTGGAGCTGATGCTGCTCTCCTGTGAGCTGAATCCCAGGTACGCGCACTGTGTCACA
CTGTACCGTAACGGGCTGACTGGTGAAGCCGATACGCTGGGCAGTCATGGGTATGTATATATCGCAATTTTGAATCGCCA
CGGGTTTAACAGACACCTCCGAGTCATTTAA

Protein sequence :
MNKDSTQTWGLKRDITPCFGARLVQEGHRLHFLADRAGFTGSFSEVQTLQLDEAFPHFVAHLELMLLSCELNPRYAHCVT
LYRNGLTGEADTLGSHGYVYIAILNRHGFNRHLRVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 8e-26 67
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 8e-26 67
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 5e-26 67
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 3e-25 66
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 3e-25 66
Z1220 NP_286755.1 structural protein Not tested TAI Protein 5e-25 66
Z1658 NP_287161.1 structural protein Not tested TAI Protein 5e-25 66
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 2e-24 65
unnamed AAL08477.1 unknown Not tested SRL Protein 3e-25 64
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 7e-25 62
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 6e-25 61
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 6e-25 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcDH1_3339 YP_006093250.1 YagBYeeUYfjZ family protein VFG0662 Protein 2e-26 67
EcDH1_3339 YP_006093250.1 YagBYeeUYfjZ family protein VFG1681 Protein 1e-25 66
EcDH1_3339 YP_006093250.1 YagBYeeUYfjZ family protein VFG1068 Protein 1e-25 64
EcDH1_3339 YP_006093250.1 YagBYeeUYfjZ family protein VFG1619 Protein 2e-25 61