Gene Information

Name : EcDH1_3332 (EcDH1_3332)
Accession : YP_006093243.1
Strain : Escherichia coli DH1
Genome accession: NC_017625
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3581849 - 3582853 bp
Length : 1005 bp
Strand : +
Note : TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: ent:Ent638_0459 ornithine carbamoyltransferase subunit F

DNA sequence :
ATGTCCGATTTATACAAAAAACACTTTCTGAAACTGCTCGACTTTACCCCTGCACAGTTCACTTCTCTGCTGACCCTTGC
CGCACAGCTCAAAGCCGATAAAAAAAATGGCAAGGAAGTACAGAAGCTTATCGGTAAAAACATCGCGCTCATCTTCGAAA
AAGACTCGACTCGTACCCGTTGCTCTTTCGAAGTTGCCGCATTTGACCAGGGCGCGCGCGTTACCTATTTAGGGCCGAGC
GGCAGCCAGATTGGGCATAAAGAGTCAATTAAGGACACCGCGCGGGTTCTCGGGCGGATGTATGACGGCATTCAGTATCG
CGGTCACGGCCAGGAAGTGGTCGAAACGCTGGCGCAGTATGCGGGCGTGCCGGTGTGGAACGGGCTGACCAACGAGTTCC
ACCCGACCCAGCTGCTGGCGGACCTGATGACCATGCAGGAGCACCTGCCGGGCAAGGCGTTTAACGAGATGACGCTGGTC
TACGCGGGCGATGCGCGCAACAACATGGGCAACTCGATGCTGGAAGCGGCGGCGCTGACCGGGCTGGATCTGCGCCTGTT
GGCCCCGAAAGCCTGCTGGCCGGAAGAGAGCCTGGTGGCGGAGTGCAGCGCGCTGGCGGAGAAGCACGGCGGGAAAATTA
CTCTGACGGAAGACGTGGCGGCAGGCGTTAAGGGCGCGGACTTTATCTATACCGACGTGTGGGTGTCGATGGGCGAGGCC
AAAGAGAAGTGGGCAGAGCGGATTGCGCTGCTGCGCGGGTATCAGGTGAACGCGCAGATGATGGCGCTGACCGACAACCC
GAACGTGAAGTTCCTGCACTGTCTGCCGGCGTTCCATGACGACCAGACTACGCTCGGCAAGCAGATGGCGAAGGAGTTCG
ATCTGCACGGCGGGATGGAGGTGACGGACGAGGTGTTTGAGTCGGCGGCGAGCATCGTGTTCGACCAGGCGGAAAACCGG
ATGCATACGATTAAGGCGGTGATGATGGCAACGCTTGGGGAGTGA

Protein sequence :
MSDLYKKHFLKLLDFTPAQFTSLLTLAAQLKADKKNGKEVQKLIGKNIALIFEKDSTRTRCSFEVAAFDQGARVTYLGPS
GSQIGHKESIKDTARVLGRMYDGIQYRGHGQEVVETLAQYAGVPVWNGLTNEFHPTQLLADLMTMQEHLPGKAFNEMTLV
YAGDARNNMGNSMLEAAALTGLDLRLLAPKACWPEESLVAECSALAEKHGGKITLTEDVAAGVKGADFIYTDVWVSMGEA
KEKWAERIALLRGYQVNAQMMALTDNPNVKFLHCLPAFHDDQTTLGKQMAKEFDLHGGMEVTDEVFESAASIVFDQAENR
MHTIKAVMMATLGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 2e-94 59
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-93 59
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-93 59
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-93 59
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-93 58
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-93 58
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-93 58