Gene Information

Name : EcDH1_3037 (EcDH1_3037)
Accession : YP_006092954.1
Strain : Escherichia coli DH1
Genome accession: NC_017625
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3259931 - 3260923 bp
Length : 993 bp
Strand : +
Note : PFAM: transport system permease protein; KEGG: grail3.13196000101; . ; K02015 iron complex transport system permease protein

DNA sequence : 
ATGATTTACGTCTCTCGCCGATTACTCATCACCTGTTTGCTGCTGGTTTCCGCCTGTGTGGTTGCAGGTATCTGGGGATT
ACGCAGCGGTGCCGTCACGCTGGAAACCTCGCAGGTATTCGCCGCGCTGATGGGCGATGCGCCGCGCAGTATGACGATGG
TGGTCACCGAATGGCGTTTACCACGCGTGCTGATGGCGCTGTTGATTGGCGCAGCACTGGGCGTCAGTGGCGCGATTTTT
CAGTCGCTGATGCGTAACCCGCTCGGCAGCCCTGACGTAATGGGCTTTAACACCGGGGCGTGGAGCGGCGTGCTGGTGGC
GATGGTGCTGTTTGGTCAGGACCTGACGGCTATCGCGCTGTCAGCAATGGTGGGCGGCATTGTCACTTCGCTGCTGGTCT
GGCTGCTCGCCTGGCGCAACGGCATCGACACCTTTCGGTTGATTATTATCGGTATCGGCGTTCGCGCCATGCTGGTGGCC
TTTAATACCTGGCTGTTGCTGAAAGCGTCTTTAGAAACGGCGCTAACAGCAGGTTTGTGGAATGCCGGATCGCTCAACGG
CCTGACGTGGGCAAAAACCTCGCCTTCCGCACCCATCATTATATTGATGCTCATTGCCGCCGCCTTACTGGTACGCCGGA
TGCGCTTGCTGGAAATGGGCGATGATACCGCGTGTGCGCTGGGCGTCAGCGTCGAACGTTCGCGTCTGTTAATGATGCTG
GTTGCAGTGGTGCTTACCGCTGCGGCAACAGCGCTTGCCGGGCCGATTTCCTTTATTGCTTTAGTCGCACCGCACATTGC
CCGACGCATTAGCGGCACCGCTCGCTGGGGGCTAACCCAGGCGGCGCTATGCGGGGCGCTGTTACTGCTGGCGGCCGATC
TCTGCGCCCAACAACTGTTTATGCCGTATCAACTTCCGGTTGGCGTCGTTACCGTCAGCCTCGGCGGTATTTACCTTATC
GTCTTGTTAATTCAGGAGTCTCGCAAAAAATGA

Protein sequence : 
MIYVSRRLLITCLLLVSACVVAGIWGLRSGAVTLETSQVFAALMGDAPRSMTMVVTEWRLPRVLMALLIGAALGVSGAIF
QSLMRNPLGSPDVMGFNTGAWSGVLVAMVLFGQDLTAIALSAMVGGIVTSLLVWLLAWRNGIDTFRLIIIGIGVRAMLVA
FNTWLLLKASLETALTAGLWNAGSLNGLTWAKTSPSAPIIILMLIAAALLVRRMRLLEMGDDTACALGVSVERSRLLMML
VAVVLTAAATALAGPISFIALVAPHIARRISGTARWGLTQAALCGALLLLAADLCAQQLFMPYQLPVGVVTVSLGGIYLI
VLLIQESRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 1e-43 50
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 1e-43 50
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 1e-43 50
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 1e-43 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcDH1_3037 YP_006092954.1 transport system permease VFG0928 Protein 7e-104 98