Gene Information

Name : EcDH1_1029 (EcDH1_1029)
Accession : YP_006090996.1
Strain : Escherichia coli DH1
Genome accession: NC_017625
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1105980 - 1106309 bp
Length : 330 bp
Strand : -
Note : PFAM: protein of unknown function DUF1219; KEGG: eca:ECA2853 hypothetical protein

DNA sequence :
ATGAACACTCTACCTGCTACAATTTCGCAGGCGGCGAAGCCCTGCCTGTCGCCAGTGGCTGTCTGGCAAATGCTACTGAC
ACGCCTGCTGGAACAACACTATGGCCTGACACTGAACGACACGCCGTTCAGTGATGAAACTGTTATTAAGGAACATATCG
ATGCTGGTATCACTCTGGCCGATGCAGTCAATTTTCTGGTGGAAAAGTACGAACTGGTACGTATCGATCACAGAGGATTT
TCGTGGCAACAACAGTCTCCATATATTTCCGTAGTAGATATTCTGCGAGCAAGGCGCTCTACCGGCTTGCTAAAAACTAA
TGTGAAATAA

Protein sequence :
MNTLPATISQAAKPCLSPVAVWQMLLTRLLEQHYGLTLNDTPFSDETVIKEHIDAGITLADAVNFLVEKYELVRIDHRGF
SWQQQSPYISVVDILRARRSTGLLKTNVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42101.1 hypothetical protein Not tested PAI II 536 Protein 8e-31 68
yeeV YP_854325.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-31 67
ECO103_3592 YP_003223449.1 hypothetical protein Not tested LEE Protein 1e-30 67
yeeV CAE85204.1 YeeV protein Not tested PAI V 536 Protein 7e-31 66
unnamed CAD66207.1 hypothetical protein Not tested PAI III 536 Protein 2e-31 66
unnamed AAL67342.1 intergenic-region protein Not tested PAI II CFT073 Protein 5e-30 66
yeeV NP_708773.1 hypothetical protein Not tested SHI-1 Protein 6e-31 65
unnamed AAL57575.1 unknown Not tested LEE Protein 8e-31 65
unnamed AAK00482.1 unknown Not tested SHI-1 Protein 4e-31 65
yeeV NP_838487.1 hypothetical protein Not tested SHI-1 Protein 6e-31 65
unnamed CAI43848.1 hypothetical protein Not tested LEE Protein 2e-30 64
aec76 AAW51759.1 Aec76 Not tested AGI-3 Protein 2e-30 64
z5091 CAD33789.1 Z5091 protein Not tested PAI I 536 Protein 3e-29 63
Z5091 NP_290242.1 hypothetical protein Not tested LEE Protein 1e-29 63
ECs4539 NP_312566.1 hypothetical protein Not tested LEE Protein 1e-29 63
unnamed AAC31486.1 L0007 Not tested LEE Protein 7e-30 63
unnamed ACU09433.1 conserved hypothetical protein Not tested LEE Protein 7e-30 63
c5149 NP_756997.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-29 63
yeeV ADD91699.1 YeeV Not tested PAI-I AL862 Protein 1e-29 63
unnamed AAL67389.1 L0007-like protein Not tested PAI II CFT073 Protein 8e-30 63
unnamed AAL08478.1 unknown Not tested SRL Protein 4e-29 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcDH1_1029 YP_006090996.1 hypothetical protein VFG1620 Protein 3e-31 68
EcDH1_1029 YP_006090996.1 hypothetical protein VFG1682 Protein 1e-31 66
EcDH1_1029 YP_006090996.1 hypothetical protein VFG0663 Protein 2e-31 65
EcDH1_1029 YP_006090996.1 hypothetical protein VFG0786 Protein 3e-30 63
EcDH1_1029 YP_006090996.1 hypothetical protein VFG1530 Protein 1e-29 63
EcDH1_1029 YP_006090996.1 hypothetical protein VFG1069 Protein 2e-29 62