Gene Information

Name : SU5_p0020 (SU5_p0020)
Accession : YP_006089964.1
Strain :
Genome accession: NC_017624
Putative virulence/resistance : Resistance
Product : Lytic Transglycosylase (LT)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 16417 - 17064 bp
Length : 648 bp
Strand : -
Note : virB1

DNA sequence :
ATGTTATCTACTTCTACTTTTCTTGCGCTTGCCATGCAATGCGCTGCCAGCGTTCATCCCGATACAACGCACGAAGTCGC
CAGGGTTGAATCAGGTTTTAACCCATATGCGATTGCGGAAATAATACCAAAGGTTAAACGCAAACCTGGTGATAAAGGCG
TAGTATCTTACTTTCCTGAATCAAAGGAGGCAGCACTTAAGATCGTTAAAAACATTGAATTACGGAATCATCGTTACTCT
GTAGGACTTATGCAAATAACGAGTACCAATTTTGCAAAGTTTGGTACAACAGCAGAGAAAATGTTTGATCCATGCGAAAA
TCTTAAGGTATCAGAAAAAATACTGGTTGACTGTTATAAACGAGGTGGCGACTTAGTGCGTGGGCTGAGTTGCTATTATT
CCGGCAATCCAGAAACAGGAGTAAAGCCAGAACCTGAATTTAATAATACAAGTTATGTACAACGTATAGGATTTAGCCCT
CCTGATAATAAAAAAAGTTTTATTGTTCCCTCTGTAAAGGAAATGATTAAAAAGGAGAGTAAGACGACTATCACACCTGA
AGAAATCATTATATATCCTCAATACGCCATGCGTGGCACTGTATCAAATGAAAAGGAAACAAAAGATGTTGAAATTAAAT
CTGAATAA

Protein sequence :
MLSTSTFLALAMQCAASVHPDTTHEVARVESGFNPYAIAEIIPKVKRKPGDKGVVSYFPESKEAALKIVKNIELRNHRYS
VGLMQITSTNFAKFGTTAEKMFDPCENLKVSEKILVDCYKRGGDLVRGLSCYYSGNPETGVKPEPEFNNTSYVQRIGFSP
PDNKKSFIVPSVKEMIKKESKTTITPEEIIIYPQYAMRGTVSNEKETKDVEIKSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP70283.1 Pilx1/VirB1-like protein Not tested HPI Protein 2e-47 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SU5_p0020 YP_006089964.1 Lytic Transglycosylase (LT) BAC0396 Protein 1e-40 52