Gene Information

Name : SU5_p0018 (SU5_p0018)
Accession : YP_006089962.1
Strain :
Genome accession: NC_017624
Putative virulence/resistance : Resistance
Product : type IV secretion/conjugal transfer ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 13371 - 16124 bp
Length : 2754 bp
Strand : -
Note : VirB3-4

DNA sequence :
ATGAGTACTCTTTTTAAAGGTCTTACGCGCCCTGCTTTAATAAGGGGGCTGGGCGTTCCGCTCTACCCCTTTCTTGGAAT
GTGCATTATTTGTGTTCTGCTTGGTGTCTGGATTCATGAGGCTATGTATGCCCTTATTCTTCCTGGCTGGTATGCCATCA
GGCGTGTAACACAGTTTGATGAACGCTTTTTTGACCTTCTGTATCTGAGAACTCTTGTCAAAGGGCATCCTTTATCAAAC
AAGCGATTCAGCGCAGTCCATTATGCGGGGAGCCAGTACGACGAAGTTGATATTTCAAAAGTGGATAACTTTATGAAGCT
GAAAGACCAGTCTTCTGTTGAAGAGTTAATTCCGTACTCTTCACATATCACTGATAATATTATCGTTACAAAAAACCGGG
ATTTGCTGGCAACCTGGCAGATAGACGGTGCTTACTTTGAGTGTGTTGATTCTGAAGATTTGTCAATTCTGACAGATCAG
CTTAATACGCTTATACGTAGCTTTGAAGGGAAATCTGTTACGCTTTATCCTCATCGTATCAGGTGTAAAAAGGACGTCAG
ACCAGTATTTAACAGTAAAATTCCTTTTGTGAACAGAGTAATGAATGATTATTACGAGTCATTCCCTCAGTCTGAATTTT
TCGAGAATAAATTATTTCTGACGATTTGTTTTAAACCTTTTACTACGGAAGATAAAGTAACACATTTCTTTTCACGCAGT
AAAAAACAAAAAGATATCTTTAAAGAGCCTGTTAATGAAATGAATGAAATTTGCGACAGGTTGAATACCTATCTGTCCCG
TTTTCATTCCCGACGTCTTGGACTTTATGAAGATCATGGGGTTGTTTATTCAGATCAGTTATCTCTGTTCCAGTATCTGC
TTTCTGGTCGATGGCAAAAGGTCAGGGTTAGCAGTAGTCCGTTTTATACATATCTGGGAGGAAAAGACCTGTTCTTTGGT
AATGATGCCGGACAAATTACCGCGTCAGACCATGCCCGGTATTTTCGTTGCATAGAGATTAAGGATTATTTTCAGGAGAC
GGATGCCGGTATTCTGGATGCTCTGATGTATCTCCCCGTTGAGTATGTCGTGACATCGTCCTTTACTGCGATGGATAAGC
AGTCAGCGATTAAGGCGCTGGATGATCAGATCGATAAGCTGGAAATGACAGATGATGCTGCCAAATCTTTGCTGGCAGAT
CTGAAAGTCGGACTGGATATGGTTTCCAGTGGATATATTTCTTTCGGGAAATCGCATCAGACCCTGGTTGTCTTTGCGGA
TTCACCGGAGCGTCTGGTGAAAGACACCAATATCGTGACTTCCACTCTGGAAGATTTGGGGCTGATTGTCACTTATTCAA
CACTGAGTCTTGGCGCAGCTTATTTTGCTCAGCTACCAGGAAATTATACGCTTCGCCCTCGTCTGAGTATCCTCAGTAGT
CTTAATTTTGCTGAAATGGAAAGTTTTCATAATTTCTTTTCAGGAAAAGAAAAAGGAAATACCTGGGGGGAAAAACTGAT
TACTCTTCGGGGGTCAGGTAATGATATCTACCATCTGAATTACCATATGACGACTGAACATCAGAATTTCTTCGGTAAGA
ACCCGACGCTGGGGCATACCGAAATTCTCGGTACGTCTAACGTGGGTAAAACCGTATTACTGATGACAAAAGCATTTGCC
GCCCAGCAGTTCGGTACGCCGGAATCATTCCCTGCAAACAGAAAACTGAAAAAACTGACCACGGTTTTTTTCGATAAAGA
CCGGGCAGGTGAAGTCGGTATACGGGCAATGGGGGGATCTTATTACCGGGTGAAGGAGGGAGAGCCGACAGGCTGGAATC
CCGCCGCACTGCCGCCAACAAAACGTAATATCGCTTTTATGAAGGACCTGGTGAGGCTGCTTTGTACTCTCAACAGTGAG
CCGCTCGATGATTACCAGAACAGCCTGATTTCAGATGCGGTTGAACGTCTTATGCAACGGTCAGATCGCTCTTATCCTAT
CAGTAAACTACGGCCTCTTATCCAGGAGCCGGATGATACTGAAACCAAACGTCATGGACTTAAAGCCCGTCTTAAGCCGT
GGACGCAGGGGGAAGAGTTTGGCTGGGTGTTCGACAATCGGGAAGACACGTTTGATGTCGATAACCTGGATGTTTTCGGT
ATTGATGGAACGGAATTCCTGGATAATAAGGTGCTGGCCAGTGCTGCTTCATTCTATCTCATCTATCGGGTCACTATGCT
GGCCGATGGTCGCAGGCTTCTTATCTACATGGATGAGTTCTGGCAATGGATCAATAACGAAGCGTTCAGGGACTTTGTTT
ACAACAAGCTGAAAACCGGACGTAAACTCGATATGGTGCTTGTAGTAGCCACACAGTCACCGGATGAACTGATTAAATCA
CCCATTGCGGCAGCGGTTCGTGAGCAATGCGCCACTCATATCTATCTGGCAAACCCGAAAGCCAAACGTAGTGAATATGT
TGATGGTTTGCAGGTCAGGGAGCTTTATTTTGACAAAATTAAAGCTATCGATCCGCTGTCCCGCCAGTTCCTTGTTGTTA
AGAACCCACAGAGGAAAGGTGAAAGTGATGATTTTGCTGCTTTTGCCAGACTGGAGCTGGGAAAAGCAGCGTATTACTTA
CCGGTTCTCAGTGCATCAAAACCCCAGTTAGAACTGTTCGATGAAATCTGGAAAGAAGGAATGAAGCCGGAAGAGTGGCT
TGATACCTATCTGGAACAGGCGAACCTGATTTGA

Protein sequence :
MSTLFKGLTRPALIRGLGVPLYPFLGMCIICVLLGVWIHEAMYALILPGWYAIRRVTQFDERFFDLLYLRTLVKGHPLSN
KRFSAVHYAGSQYDEVDISKVDNFMKLKDQSSVEELIPYSSHITDNIIVTKNRDLLATWQIDGAYFECVDSEDLSILTDQ
LNTLIRSFEGKSVTLYPHRIRCKKDVRPVFNSKIPFVNRVMNDYYESFPQSEFFENKLFLTICFKPFTTEDKVTHFFSRS
KKQKDIFKEPVNEMNEICDRLNTYLSRFHSRRLGLYEDHGVVYSDQLSLFQYLLSGRWQKVRVSSSPFYTYLGGKDLFFG
NDAGQITASDHARYFRCIEIKDYFQETDAGILDALMYLPVEYVVTSSFTAMDKQSAIKALDDQIDKLEMTDDAAKSLLAD
LKVGLDMVSSGYISFGKSHQTLVVFADSPERLVKDTNIVTSTLEDLGLIVTYSTLSLGAAYFAQLPGNYTLRPRLSILSS
LNFAEMESFHNFFSGKEKGNTWGEKLITLRGSGNDIYHLNYHMTTEHQNFFGKNPTLGHTEILGTSNVGKTVLLMTKAFA
AQQFGTPESFPANRKLKKLTTVFFDKDRAGEVGIRAMGGSYYRVKEGEPTGWNPAALPPTKRNIAFMKDLVRLLCTLNSE
PLDDYQNSLISDAVERLMQRSDRSYPISKLRPLIQEPDDTETKRHGLKARLKPWTQGEEFGWVFDNREDTFDVDNLDVFG
IDGTEFLDNKVLASAASFYLIYRVTMLADGRRLLIYMDEFWQWINNEAFRDFVYNKLKTGRKLDMVLVVATQSPDELIKS
PIAAAVREQCATHIYLANPKAKRSEYVDGLQVRELYFDKIKAIDPLSRQFLVVKNPQRKGESDDFAAFARLELGKAAYYL
PVLSASKPQLELFDEIWKEGMKPEEWLDTYLEQANLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP70302.1 Pilx3-4/VirB3-4-like protein Not tested HPI Protein 0.0 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SU5_p0018 YP_006089962.1 type IV secretion/conjugal transfer ATPase BAC0398 Protein 0.0 44