Gene Information

Name : SU5_03379 (SU5_03379)
Accession : YP_006088986.1
Strain : Salmonella enterica B182
Genome accession: NC_017623
Putative virulence/resistance : Virulence
Product : Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG), Protein InvG precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3705708 - 3707252 bp
Length : 1545 bp
Strand : -
Note : -

DNA sequence :
ATGGCGCTACAGCTAAAGGAGCCTGTCATTGTTAGCAAAATGGCGGCACGAAAAAAAATTACGGGCAACTTTGAGTTTCA
CGATCCTAACGCATTACTGGAGAAGCTTTCCCTACAACTGGGGCTGATTTGGTATTTCGATGGGCAGGCTATCTATATTT
ATGACGCCAGTGAAATGCGCAATGCCGTGGTTTCTTTACGCAACGTCTCACTCAATGAGTTCAACAATTTTCTAAAACGC
TCAGGTTTATATAACAAAAATTACCCGCTACGTGGCGATAACCGTAAAGGAACATTCTATGTTTCAGGGCCACCCGTCTA
TGTTGATATGGTGGTCAACGCCGCCACCATGATGGACAAGCAAAACGATGGTATTGAGCTGGGACGCCAGAAAATAGGGG
TGATGCGTCTGAACAATACCTTCGTGGGCGATCGTACCTACAATCTGCGCGATCAGAAAATGGTTATCCCCGGTATTGCT
ACGGCGATTGAAAGGTTATTGCAGGGAGAAGAGCAACCCTTAGGTAATATTGTCAGTAGCGAACCTCCGGCGATGCCAGC
GTTTTCAGCGAATGGAGAAAAAGGTAAAGCAGCAAATTATGCCGGTGGCATGAGTCTGCAGGAAGCTTTAAAGCAAAACG
CCGCGGCGGGCAATATTAAAATCGTGGCCTATCCGGATACCAACAGTTTGTTAGTAAAAGGAACGGCTGAGCAGGTGCAT
TTTATCGAAATGCTGGTTAAAGCGCTGGATGTCGCCAAACGTCACGTAGAATTATCCCTGTGGATTGTCGATCTTAATAA
AAGCGATCTGGAGCGTTTGGGCACTTCATGGAGCGGCAGCATTACTATTGGGGACAAACTTGGCGTGTCATTAAACCAGG
CTTCAATAAGTACCCTCGATGGCAGTCGATTCATCGCCGCGGTAAATGCGTTAGAAGAGAAGAAACAGGCGACGGTGGTT
TCGCGCCCGGTATTACTGACTCAGGAAAATGTTCCCGCTATTTTTGATAACAACAGAACGTTTTACACCAAGCTGATTGG
GGAACGTAATGTGGCGCTTGAGCATGTAACATACGGAACAATGATCCGAGTGCTGCCCCGTTTTTCCGCAGATGGTCAGA
TAGAAATGTCGCTGGACATTGAAGATGGTAACGATAAGACGCCGCAATCCGATACTACCACCTCCGTAGATGCGTTACCC
GAAGTCGGACGAACGTTAATTAGCACTATTGCGAGAGTTCCGCACGGAAAAAGTTTGCTGGTCGGTGGTTATACACGGGA
TGCAAATACCGATACTGTCCAAAGTATTCCGTTTTTAGGCAAATTACCGCTTATTGGTAGCCTGTTCCGTTATTCCAGTA
AGAATAAAAGTAATGTTGTTCGTGTATTCATGATTGAACCAAAAGAAATTGTCGACCCGTTAACGCCGGATGCCAGCGAA
TCGGTAAACAATATTCTGAAACAAAGCGGTGCCTGGAGTGGGGACGATAAGTTACAGAAATGGGTTCGTGTTTATCTGGA
TAGAGGTCAGGAGGCAATTAAATGA

Protein sequence :
MALQLKEPVIVSKMAARKKITGNFEFHDPNALLEKLSLQLGLIWYFDGQAIYIYDASEMRNAVVSLRNVSLNEFNNFLKR
SGLYNKNYPLRGDNRKGTFYVSGPPVYVDMVVNAATMMDKQNDGIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIA
TAIERLLQGEEQPLGNIVSSEPPAMPAFSANGEKGKAANYAGGMSLQEALKQNAAAGNIKIVAYPDTNSLLVKGTAEQVH
FIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQASISTLDGSRFIAAVNALEEKKQATVV
SRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALP
EVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASE
SVNNILKQSGAWSGDDKLQKWVRVYLDRGQEAIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
invG NP_457292.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 0.0 99
invG NP_806501.1 virulence-associated secretory protein Virulence SPI-1 Protein 0.0 99
invG YP_217817.1 invasion protein; outer membrane Virulence SPI-1 Protein 0.0 99
invG NP_461819.1 outer membrane secretin precursor Virulence SPI-1 Protein 0.0 99
ECs3733 NP_311760.1 EivG Not tested LIM Protein 9e-143 56
invG AAS66859.1 InvG Not tested SSR-2 Protein 2e-125 50
ysaC AAS66838.1 YsaC Not tested SSR-1 Protein 8e-93 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SU5_03379 YP_006088986.1 Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG), Protein InvG precursor VFG0559 Protein 0.0 99
SU5_03379 YP_006088986.1 Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG), Protein InvG precursor VFG1004 Protein 1e-122 52
SU5_03379 YP_006088986.1 Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG), Protein InvG precursor VFG2463 Protein 3e-100 43