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Name : SU5_03377 (SU5_03377) Accession : YP_006088984.1 Strain : Salmonella enterica B182 Genome accession: NC_017623 Putative virulence/resistance : Virulence Product : Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV), Invasion protein InvA Function : - COG functional category : - COG ID : - EC number : - Position : 3702511 - 3704568 bp Length : 2058 bp Strand : - Note : - DNA sequence : GTGCTGCTTTCTCTACTTAACAGTGCTCGTTTACGACCTGAATTACTGATTCTGGTACTAATGGTGATGATCATTTCTAT GTTCGTCATTCCATTACCTACCTATCTGGTTGATTTCCTGATCGCACTGAATATCGTACTGGCGATATTGGTGTTTATGG GGTCGTTCTACATTGACAGAATCCTCAGTTTTTCAACGTTTCCTGCGGTACTGTTAATTACCACGCTCTTTCGTCTGGCA TTATCAATCAGTACCAGCCGTCTTATCTTGATTGAAGCCGATGCCGGTGAAATTATCGCCACGTTCGGGCAATTCGTTAT TGGCGATAGCCTGGCGGTGGGTTTTGTTGTCTTCTCTATTGTCACCGTGGTCCAGTTTATCGTTATTACCAAAGGTTCAG AACGCGTCGCGGAAGTCGCGGCCCGATTTTCTCTGGATGGTATGCCCGGTAAACAGATGAGTATTGATGCCGATTTGAAG GCCGGTATTATTGATGCGGATGCCGCGCGCGAACGGCGAAGCGTACTGGAAAGAGAAAGCCAGCTTTACGGTTCCTTTGA CGGTGCGATGAAGTTTATCAAAGGTGACGCTATTGCCGGCATCATTATCATCTTTGTGAACTTTATTGGCGGTATTTCGG TGGGGATGACCCGCCATGGTATGGATTTGTCCTCCGCCCTGTCTACTTATACCATGCTGACCATTGGTGATGGTCTTGTC GCCCAGATCCCCGCATTGTTGATTGCGATTAGTGCCGGTTTTATCGTGACTCGCGTAAATGGCGATAGCGATAATATGGG GCGGAATATCATGACGCAGCTGTTGAACAACCCATTTGTATTGGTTGTTACGGCTATTTTGACCATTTCAATGGGAACTC TGCCGGGATTCCCGCTGCCGGTTTTTGTTATTTTATCGGTGGTTTTAAGCGTACTCTTCTATTTTAAATTCCGTGAAGCA AAACGTAGTGCCGCCAAACCTAAAACCAGCAAAGGCGAGCAGCCGCTCAGTATTGAGGAAAAAGAAGGGTCGTCGTTAGG ACTGATTGGCGATCTCGATAAAGTCTCTACAGAGACCGTACCGTTGATATTACTTGTGCCGAAGAGCCGGCGTGAAGATC TGGAAAAAGCTCAACTTGCGGAGCGTCTACGTAGTCAGTTCTTTATTGATTATGGCGTGCGCCTGCCGGAAGTATTGTTA CGCGATGGCGAGGGCCTGGACGATAACAGCATCGTATTGTTGATTAATGAGATCCGTGTTGAACAATTTACGGTCTATTT TGATTTGATGCGAGTGGTAAATTATTCCGATGAAGTTGTTTCCTTTGGCATTAATCCAACAATCTATCAGCAAGGTAGCA GCCAGTATTTCTGGGTAACGCATGAAGAGGGGGAGAAACTCCGGGAGCTTGGCTATGTGTTGCGGAACGCGCTTGATGAG CTTTACCACTGTCTGGCGGTGACGCTGGCGCGCAACGTCAATGAATATTTCGGTATTCAGGAAACAAAACATATGCTGGA CCAACTGGAAGCGAAATTTCCTGATTTACTTAAAGAAGTGCTCAGACATGCCACGGTACAACGTATATCTGAAGTTTTGC AGCGTTTGTTAAGCGAACGTGTTTCCGTGCGTAATATGAAATTAATTATGGAAGCGCTCGCATTGTGGGCGCCAAGAGAA AAAGATGTCATTAACCTTGTGGAGCATATTCGTGGGGCAATGGCGCGTTATATTTGCCATAAATTCGCCAATGGCGGCGA ATTACGAGCAGTAATGGTATCTGCTGAAGTTGAGGATGTTATTCGCAAAGGGATCCGTCAGACCTCTGGCAGTACCTTCC TCAGCCTTGACCCGGAAGCCTCCGCTAATTTGATGGATCTCATTACACTTAAGTTGGATGATTTATTGATTGCACATAAA GATCTTGTCCTCCTTACGTCTGTCGATGTCCGTCGATTTATTAAGAAAATGATTGAAGGTCGTTTTCCGGATCTGGAGGT TTTATCTTTCGGTGAGATAGCAGATAGCAAGTCAGTGAATGTTATAAAAACAATATAA Protein sequence : MLLSLLNSARLRPELLILVLMVMIISMFVIPLPTYLVDFLIALNIVLAILVFMGSFYIDRILSFSTFPAVLLITTLFRLA LSISTSRLILIEADAGEIIATFGQFVIGDSLAVGFVVFSIVTVVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADLK AGIIDADAARERRSVLERESQLYGSFDGAMKFIKGDAIAGIIIIFVNFIGGISVGMTRHGMDLSSALSTYTMLTIGDGLV AQIPALLIAISAGFIVTRVNGDSDNMGRNIMTQLLNNPFVLVVTAILTISMGTLPGFPLPVFVILSVVLSVLFYFKFREA KRSAAKPKTSKGEQPLSIEEKEGSSLGLIGDLDKVSTETVPLILLVPKSRREDLEKAQLAERLRSQFFIDYGVRLPEVLL RDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGINPTIYQQGSSQYFWVTHEEGEKLRELGYVLRNALDE LYHCLAVTLARNVNEYFGIQETKHMLDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPRE KDVINLVEHIRGAMARYICHKFANGGELRAVMVSAEVEDVIRKGIRQTSGSTFLSLDPEASANLMDLITLKLDDLLIAHK DLVLLTSVDVRRFIKKMIEGRFPDLEVLSFGEIADSKSVNVIKTI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| invA | YP_217815.1 | invasion protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
| invA | NP_457290.1 | possible secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 0.0 | 99 |
| invA | NP_806499.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
| invA | NP_461817.1 | needle complex export protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
| ECs3731 | NP_311758.1 | EivA | Not tested | LIM | Protein | 1e-178 | 65 |
| invA | AAS66860.1 | InvA | Not tested | SSR-2 | Protein | 1e-165 | 64 |
| ysaV | AAS66840.1 | YsaV | Not tested | SSR-1 | Protein | 3e-143 | 55 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 4e-88 | 41 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 9e-97 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SU5_03377 | YP_006088984.1 | Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV), Invasion protein InvA | VFG0557 | Protein | 0.0 | 99 |
| SU5_03377 | YP_006088984.1 | Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV), Invasion protein InvA | VFG1006 | Protein | 2e-171 | 65 |
| SU5_03377 | YP_006088984.1 | Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV), Invasion protein InvA | VFG1780 | Protein | 4e-144 | 54 |
| SU5_03377 | YP_006088984.1 | Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV), Invasion protein InvA | VFG0384 | Protein | 1e-98 | 43 |
| SU5_03377 | YP_006088984.1 | Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV), Invasion protein InvA | VFG0064 | Protein | 1e-97 | 43 |
| SU5_03377 | YP_006088984.1 | Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV), Invasion protein InvA | VFG0198 | Protein | 1e-93 | 42 |
