|
Name : SU5_03354 (SU5_03354) Accession : YP_006088962.1 Strain : Salmonella enterica B182 Genome accession: NC_017623 Putative virulence/resistance : Virulence Product : Type III secretion cytoplasmic protein (YscF) Function : - COG functional category : - COG ID : - EC number : - Position : 3680184 - 3680426 bp Length : 243 bp Strand : - Note : - DNA sequence : ATGGCAACACCTTGGTCAGGCTATCTGGATGACGTCTCAGCAAAATTTGATACGGGCGTTGATAATCTACAAACGCAGGT AACAGAGGCGCTGGATAAATTAGCAGCAAAACCCTCCGATCCGGCGCTACTGGCGGCGTATCAGAGTAAGCTCTCGGAAT ATAACTTGTACCGTAACGCGCAATCGAACACGGTAAAAGTCTTTAAGGATATTGATGCTGCCATTATTCAGAACTTCCGT TAA Protein sequence : MATPWSGYLDDVSAKFDTGVDNLQTQVTEALDKLAAKPSDPALLAAYQSKLSEYNLYRNAQSNTVKVFKDIDAAIIQNFR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prgI | NP_461794.1 | needle complex major subunit | Virulence | SPI-1 | Protein | 1e-30 | 100 |
| prgI | AAX49613.1 | PrgI | Virulence | SPI-1 | Protein | 9e-31 | 100 |
| prgI | YP_217792.1 | cell invasion protein | Virulence | SPI-1 | Protein | 1e-30 | 100 |
| prgI | NP_457267.1 | pathogenicity 1 island effector protein | Virulence | SPI-1 | Protein | 1e-29 | 95 |
| prgI | NP_806476.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 1e-29 | 95 |
| ECs3718 | NP_311745.1 | EprI | Not tested | LIM | Protein | 5e-20 | 63 |
| ysaG | AAS66835.1 | YsaG | Not tested | SSR-1 | Protein | 9e-17 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SU5_03354 | YP_006088962.1 | Type III secretion cytoplasmic protein (YscF) | VFG0535 | Protein | 4e-31 | 100 |
| SU5_03354 | YP_006088962.1 | Type III secretion cytoplasmic protein (YscF) | VFG0996 | Protein | 2e-19 | 69 |
| SU5_03354 | YP_006088962.1 | Type III secretion cytoplasmic protein (YscF) | VFG2466 | Protein | 1e-17 | 56 |
