Gene Information

Name : SU5_03342 (SU5_03342)
Accession : YP_006088950.1
Strain : Salmonella enterica B182
Genome accession: NC_017623
Putative virulence/resistance : Virulence
Product : Manganese ABC transporter substrate-binding protein SitA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3670477 - 3671394 bp
Length : 918 bp
Strand : +
Note : -

DNA sequence : 
ATGACGAATCTACATCGTCTGAAAACACTCCTGCTTGCCGGTATTGTCGCGATACTCGCGCTATCGCCAGCCTATGCAAA
AGAGAAATTTAAAGTCATCACCACGTTTACCGTTATTGCCGACATGGCGAAAAACGTGGCGGGCGACGCAGCGGAAGTCA
GCTCGATTACCAAACCCGGCGCTGAAATCCATGAGTATCAGCCAACGCCCGGCGATATTAAACGAGCGCAGGGGGCACAG
CTTATCCTCGCGAATGGTCTGAACCTGGAGCGATGGTTTGCCCGCTTTTATCAGCACCTTTCCGGCGTGCCGGAAGTCGT
CGTCTCCACCGGTGTCAAACCGATGGGCATTACCGAAGGCCCGTATAACGGTAAACCGAACCCGCACGCCTGGATGTCGG
CAGAAAACGCGCTGATTTATGTCGATAACATTCGCGACGCCCTGGTGAAGTACGATCCGGATAATGCGCAGATCTATAAG
CAAAACGCCGAGCGCTATAAAGCGAAAATTCGCCAGATGGCCGATCCGTTGCGTGCCGAACTGGAAAAAATTCCCGCCGA
TCAGCGCTGGCTGGTCACCAGTGAAGGCGCGTTCTCTTACCTAGCGCGCGATAACGACATGAAAGAGCTTTATCTCTGGC
CAATTAACGCCGATCAACAGGGAACGCCAAAACAGGTGCGTAAAGTGATTGATACTATTAAAAAGCACCATATTCCCGCC
ATCTTTAGCGAGAGTACGGTTTCCGATAAACCGGCCCGTCAGGTCGCGCGTGAATCCGGCGCGCATTATGGCGGCGTGCT
GTATGTCGATTCTCTGAGCGCCGCTGACGGCCCTGTGCCAACCTATCTGGATCTGCTGCGCGTCACGACCGAAACCATCG
TCAACGGCATTAACGACGGACTGAGGAGTCAACAATGA

Protein sequence : 
MTNLHRLKTLLLAGIVAILALSPAYAKEKFKVITTFTVIADMAKNVAGDAAEVSSITKPGAEIHEYQPTPGDIKRAQGAQ
LILANGLNLERWFARFYQHLSGVPEVVVSTGVKPMGITEGPYNGKPNPHAWMSAENALIYVDNIRDALVKYDPDNAQIYK
QNAERYKAKIRQMADPLRAELEKIPADQRWLVTSEGAFSYLARDNDMKELYLWPINADQQGTPKQVRKVIDTIKKHHIPA
IFSESTVSDKPARQVARESGAHYGGVLYVDSLSAADGPVPTYLDLLRVTTETIVNGINDGLRSQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-135 100
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-135 99
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-135 99
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-135 99
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-135 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SU5_03342 YP_006088950.1 Manganese ABC transporter substrate-binding protein SitA BAC0349 Protein 1e-135 99
SU5_03342 YP_006088950.1 Manganese ABC transporter substrate-binding protein SitA BAC0439 Protein 8e-90 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SU5_03342 YP_006088950.1 Manganese ABC transporter substrate-binding protein SitA VFG0525 Protein 1e-135 99