Gene Information

Name : SU5_02989 (SU5_02989)
Accession : YP_006088602.1
Strain : Salmonella enterica B182
Genome accession: NC_017623
Putative virulence/resistance : Unknown
Product : Phage integrase, Phage P4-associated
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3238995 - 3240107 bp
Length : 1113 bp
Strand : +
Note : -

DNA sequence :
ATGGGACTATCACTCCTCATCGACACCACGGGCAGCAAAGGCTGGCGTTTCCGCTATCGCTTTGCAGGTAAACCTAAGAT
GATCTCCTTCGGCGTTTATGGCGATGTGTCATTGGCACAAGCACGTGCTAAACGTGATGAGGCGCGTTCGATGTTAGCTA
AAGGGATCAACCCAAGTGAAGCCAGAAAAGCGAATAAAATAGCTTTACAGTTCGCGCATGAGAACAGCTTTGAGTCTGTG
GCCAGAGAATGGCACTCATCGAAAAAAACCACCTGGTCAGAGGGGTATGCAAAAGAGGTTCTCAACTGCATGGAAAGGGA
TATTTTCCCTTTCATCGGACAACGCCCAATTGAGCAGATTGAACCACTAGAGCTGCTCACCGTCCTGCAAAAAATTGAGA
AAAGAGGTGCGCTAGAGCAAACCAGCAAGATCCGCCGCCGCTGCGGTGAAGTGCTTCGTTATGCTGTTGCCACAGGTAGA
GCAAAATATAATTTTGCACCCGATTTAGCTATCGCACTCAACAAACCTAAAACTCAACACTTCCCGTTCCTGACTGAAAG
CGAGTTGCCCGAGTTCGTCAATGCTCTGGATAACTATCAGGGCAGTTTAGTCACCAAATACGCCACCCAGCTATTGATGC
TAACAGGCGTGCGAACAATTGAACTACGCGCAGCGGAATGGGCTGAGTTTGATTTAGATAATGCCTTATGGGAGATCCCC
AAAGAACGGATGAAGAAACGCCGCCCCCATCTGGTTCCGTTATCTACTCAGGCGATCAGCATCCTGAAAAAGCTGCAAGA
AATAACTGGGAACTACAGCCTCGTTTTCCCTGGACGAAATGACGTAAGGAAGCCAATGAGTGAAGCCAGTATAAACAAAG
TGATAAAACTACTGGGCTATCATGGTCGGTTAACGGGCCATGGCTTCAGGCATACCATGAGTACTATTTTGCATGAGCTT
GGTTTTGAAAGCGCTTGGATTGAGATGCAACTTGCGCATGTTGATAAAAACTCTATTCGAGGAACTTACAATCATGCGCA
ATATTTAGAAAATCGAAGAAAAATGATGCAAATTTATAGTGACATGTTGCTAAATGAGTTCCCTATTAAATAG

Protein sequence :
MGLSLLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVSLAQARAKRDEARSMLAKGINPSEARKANKIALQFAHENSFESV
AREWHSSKKTTWSEGYAKEVLNCMERDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVATGR
AKYNFAPDLAIALNKPKTQHFPFLTESELPEFVNALDNYQGSLVTKYATQLLMLTGVRTIELRAAEWAEFDLDNALWEIP
KERMKKRRPHLVPLSTQAISILKKLQEITGNYSLVFPGRNDVRKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTILHEL
GFESAWIEMQLAHVDKNSIRGTYNHAQYLENRRKMMQIYSDMLLNEFPIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int ACU09430.1 integrase Not tested LEE Protein 2e-116 65
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 3e-116 65
ECs4534 NP_312561.1 integrase Not tested LEE Protein 3e-116 65
int AAC31482.1 CP4-like integrase Not tested LEE Protein 2e-116 65
int CAC39282.1 integrase Not tested LPA Protein 2e-115 65
aec33 AAW51716.1 Int Not tested AGI-3 Protein 7e-116 65
int AAD44730.1 Int Not tested SHI-2 Protein 1e-113 64
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 4e-114 64
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 4e-114 64
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 3e-114 64
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 5e-110 63
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 7e-109 59
int AAK00456.1 Int Not tested SHI-1 Protein 3e-68 42
int CAC81896.1 integrase Not tested LEE II Protein 6e-68 42
ECO111_3718 YP_003236059.1 putative integrase Not tested LEE Protein 5e-67 42
APECO1_3534 YP_854214.1 P4-like integrase Not tested PAI I APEC-O1 Protein 2e-68 42
ORF_1 AAZ04412.1 phage integrase Not tested PAI I APEC-O1 Protein 2e-68 42
c5216 NP_757064.1 prophage P4 integrase Not tested PAI II CFT073 Protein 1e-68 42
int AAK16198.1 Int Not tested PAI-I AL862 Protein 4e-69 42
int ADD91747.1 P4 integrase Not tested PAI-I AL862 Protein 4e-69 42
int AAL51003.1 CP4-like integrase Not tested LEE Protein 7e-69 42
int AAT48697.1 CP4-like integrase Not tested PAI I 4787 Protein 7e-69 42
c3556 NP_755431.1 prophage P4 integrase Not tested PAI I CFT073 Protein 9e-69 42
intP4 CAE85151.1 CP4 integrase protein Not tested PAI V 536 Protein 6e-69 42
ECUMN_3322 YP_002414004.1 integrase Not tested Not named Protein 1e-67 42
S4822 NP_838459.1 P4-type integrase Not tested SHI-1 Protein 1e-68 41
SF2964 NP_708738.1 P4-type integrase Not tested SHI-1 Protein 1e-68 41
ECO103_3550 YP_003223418.1 integrase Not tested LEE Protein 3e-68 41
int-phe AAL57571.1 CP4-like integrase Not tested LEE Protein 2e-68 41
ECO26_5300 YP_003232178.1 integrase Not tested LEE Protein 3e-68 41
int AAL51028.1 CP4-like integrase Not tested LEE Protein 2e-68 41
int-phe AAL60261.1 Int-phe Not tested LEE Protein 2e-68 41
Z4313 NP_289539.1 pathogenicity island integrase Not tested OI-122 Protein 2e-67 41
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 2e-65 41
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 2e-65 41
int AAN62223.1 putative integrase Not tested PAGI-3(SG) Protein 7e-59 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SU5_02989 YP_006088602.1 Phage integrase, Phage P4-associated VFG0783 Protein 1e-116 65
SU5_02989 YP_006088602.1 Phage integrase, Phage P4-associated VFG0598 Protein 2e-114 64
SU5_02989 YP_006088602.1 Phage integrase, Phage P4-associated VFG1693 Protein 4e-69 42
SU5_02989 YP_006088602.1 Phage integrase, Phage P4-associated VFG0626 Protein 6e-69 41