Gene Information

Name : SU5_02459 (SU5_02459)
Accession : YP_006088086.1
Strain : Salmonella enterica B182
Genome accession: NC_017623
Putative virulence/resistance : Virulence
Product : Type III secretion system SopE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2689194 - 2689865 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence : 
TTGAACCAAGTAAAAAGAAAAACAACGGAGAAGGACATTTTTGCAAAAAGTATTACTGCCGTTAGAAATAGCTTTATCAG
CCTGTCGACGAGTCTGTCAGATCGTTTTAGCCTGCATCAACAAACAGACATACCGACTACCCATTTTCATCGTGGGAACG
CTTCTGAGGGTAGGGCGGTATTAACCAGTAAAACTGTTAAAGATTTTATGCTGCAAAAGCTCAATAGTCTGGATATCAAA
GGTAATGCGAGTAAAGATCCGGCCTATGCTCGTCAGACATGCGAAGCCATATTATCAGCCGTGTACAGTAATAATAAAGA
TCAATGTTGTAAATTACTCATCAGTAAAGGGGTCAGTATTACCCCCTTTTTGAAAGAGATAGGAGAGGCTGCGCAGAATG
CGGGGCTACCTGGGGAGATAAAAAATGGCGTATTTACTCCAGGTGGGGCAGGGGCGAATCCTTTTGTCGTCCCCCTCATT
GCTTCCGCGAGTATTAAATATCCGCATATGTTTATAAATCATAATCAGCAGGTATCTTTTAAAGCGTATGCTGAGAAAAT
CGTTATGAAAGAGGTTACGCCGCTGTTTAATAAGGGGACGATGCCAACGCCACAACAATTTCAGTTAACTATAGAAAATA
TTGCGAATAAGTATCTTCAGAATGCCTCCTGA

Protein sequence : 
MNQVKRKTTEKDIFAKSITAVRNSFISLSTSLSDRFSLHQQTDIPTTHFHRGNASEGRAVLTSKTVKDFMLQKLNSLDIK
GNASKDPAYARQTCEAILSAVYSNNKDQCCKLLISKGVSITPFLKEIGEAAQNAGLPGEIKNGVFTPGGAGANPFVVPLI
ASASIKYPHMFINHNQQVSFKAYAEKIVMKEVTPLFNKGTMPTPQQFQLTIENIANKYLQNAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sopE NP_458691.1 invasion-associated secreted protein. Virulence SPI-7 Protein 6e-76 72
sopE NP_807899.1 invasion-associated secreted protein Virulence SPI-7 Protein 6e-76 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SU5_02459 YP_006088086.1 Type III secretion system SopE VFG0467 Protein 5e-101 99