Gene Information

Name : SU5_02021 (SU5_02021)
Accession : YP_006087655.1
Strain : Salmonella enterica B182
Genome accession: NC_017623
Putative virulence/resistance : Virulence
Product : Type III secretion effector SseF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2224601 - 2225383 bp
Length : 783 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATTCATATTCCGTCAGCGGCAAGTAATATAGTCGATGGTAATAGTCCTCCTTCCGATATACAAGCGAAGGAGGT
ATCGTTTCCTCCCCCTGAAATTCCAGCGCCTGGCACCCCCGCAGCCCCTGTGCTGCTTACGCCTGAACAAATAAGGCAGC
AGAGGGATTATGCTATACATTTTATGCAATACACTATTCGTGCGCTGGGTGCGACAGTCGTGTTTGGGTTATCGGTTGCT
GCAGCGGTAATTTCTGGCGGGGCAGGATTACCCATTGCTATTCTTGCGGGGGCGGCGCTCGTGATTGCTATTGGGGATGC
TTGCTGTGCGTATCATAATTATCAATTGATATGTCAGCAAAAGGAGCCGTTACAAACCGCCAGTGATAGCGTTGCTCTTG
TGGTCAGTGCGCTGGCCTTAAAATGTGGGGCAAGTCTTAACTGCGCTAACACCCTTGCTAATTGTCTTTCTTTATTAATA
CGTTCAGGAATCGCTATTTCTATGTTGGTTTTACCCCTACAGTTTCCACTGCCCGCCGCTGAAAATATAGCGGCCTCTTT
GGATATGGGGAGTGTAATTACCTCCGTTAGCCTGACGGCGATAGGTGCGGTACTGGATTATTGCTTTGCCCGCCCCTCTG
GCGACGATCAGGAAAATTCTGTTGATGAACTTCATGCCGATCCCAGTGCGTTATTGGCGGAACAAATGGCAGCGCTCTGT
CAATCTGCTACTGCACCTGCATTAATGGACAGTTCTGGTCATACATCTCGGGGAGAACCATGA

Protein sequence : 
MKIHIPSAASNIVDGNSPPSDIQAKEVSFPPPEIPAPGTPAAPVLLTPEQIRQQRDYAIHFMQYTIRALGATVVFGLSVA
AAVISGGAGLPIAILAGAALVIAIGDACCAYHNYQLICQQKEPLQTASDSVALVVSALALKCGASLNCANTLANCLSLLI
RSGIAISMLVLPLQFPLPAAENIAASLDMGSVITSVSLTAIGAVLDYCFARPSGDDQENSVDELHADPSALLAEQMAALC
QSATAPALMDSSGHTSRGEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseF NP_460369.1 secreted effector protein Virulence SPI-2 Protein 2e-89 99
sseF AAC28885.1 SseF Virulence SPI-2 Protein 2e-89 99
sseF CAA12191.1 SseF Virulence SPI-2 Protein 3e-88 98
sseF NP_805075.1 pathogenicity island effector protein Virulence SPI-2 Protein 2e-88 97
sseF YP_216412.1 secretion system effector protein SseF Virulence SPI-2 Protein 2e-86 97
sseF NP_456124.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 2e-88 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SU5_02021 YP_006087655.1 Type III secretion effector SseF VFG0505 Protein 9e-90 99