Gene Information

Name : SU5_01999 (SU5_01999)
Accession : YP_006087633.1
Strain : Salmonella enterica B182
Genome accession: NC_017623
Putative virulence/resistance : Virulence
Product : Ribokinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.15
Position : 2201431 - 2202657 bp
Length : 1227 bp
Strand : -
Note : -

DNA sequence :
ATGTTTAAAGAAGAAAGACGTCATGCCATCATTAATTTACTGATAAAGGATAATAGTGTTAGCGTCAGTAAACTTTCAGA
CCTTTATAAGGTTAGCCAGGAGACTATTCGTTCCGATCTACGCTATTTCCAGAAATCAGGTATGCTTCAGCGTTGCTATG
GCGGAGGGATTTTAAACCGTGACGCGCTGAGTAAGCTTATCACTGAAAATAAGATTGATATCTCCAGCACTATCGCCACG
CCAATCCATCAGGATGCAAAACTGCGCCGGGAAAACCCAAAAAAAGCAGGCAAGGTGTGTGTTTTAGGCTCATTCAATAT
TGATGTTTCAGCAACCGTGCCGTGGTTTCCACAAAGCGGAGAATCCATTCTGGCCAGTCAATTTGGATTCTATCCTGGAG
GTAAAGGAGCCAACCAGGCTTTAGCGGCAAACAATGCCGGCGCTGCGGCACATTTTATTTTTAAAGTGGGCAAAGATCAG
TTCAGCGCATTTGCTATGAATCATATTATTCAATCAGGCATCACCTCATACAGCGCGTATCAAACAGATAAAGCGCCCAC
CGGTAGCGCATTGATCTATGTCTCCGCCGTGGATGGCGATAATATTATCGCCATCTACCCTGGCGCCAATATGATGCTCA
CCACGCAAGAGATTAACGAGCAACACCGTTATATCGCCGAGTCTGACGTTATGTTAATGCAGCTCGAAACGAACATTGAA
GCGTTGACTGAATTTATTCGTCTGGGCAAACAAGAAAATAAAATGATCATGCTGAATCCTGCCCCCTATACGAAACAGGT
GACGCATTTATTATCTGATATTGACATCATCACGCCGAATGAAACTGAAGCCTCTTTTTTATCCGGCGTAACCATTACTG
ATATTAATGATGCGAAAAAAGCCGGAAATATTATTCTGCAATCCGGGGTGAAAAAAGTCATCATTACCCTTGGCGCCCGT
GGTTCTCTGCTCTGTGAGCACGCCCGCACGTTGTATATTCCTGCATGGAGCGCCGTGGTAAAAGATGCCGCCGGGGCCGG
TGACGCTTTTAATGGCGCCTTAGCCGCCGCGCTGGCGCGACAAGCAGATATGGTCGCAGCCATTCAATATGCCTCCGCTT
TCGCTTCTCTGGCGGTGGAACAAGTCGGTGCGTCGAGTATGCCTCAGCACTTGCAGGTTTTACATCGAATGCGTACCCAA
TCTAATAAAGTCATTAACATTAATTAA

Protein sequence :
MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALSKLITENKIDISSTIAT
PIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQ
FSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGAR
GSLLCEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQ
SNKVININ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF 408 CAB37417.1 - Not tested SPI-2 Protein 3e-164 99
rbsk YP_216390.1 DeoR family transcriptional regulator Not tested SPI-2 Protein 1e-163 99
orf408 NP_460347.1 regulatory protein Not tested SPI-2 Protein 5e-164 99
APECO1_1076 YP_853096.1 carbohydrate kinase Not tested PAI IV APEC-O1 Protein 4e-56 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SU5_01999 YP_006087633.1 Ribokinase VFG0483 Protein 2e-164 99