Gene Information

Name : SSUD12_0913 (SSUD12_0913)
Accession : YP_006082476.1
Strain : Streptococcus suis D12
Genome accession: NC_017621
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 926658 - 927410 bp
Length : 753 bp
Strand : +
Note : -

DNA sequence : 
ATGTTATTAGAAATCAATCATTTAGAAAAAGTTTACCGCACGCGCTTTTCAAAAGAGGAAACTCGTGCCTTGCAAGATGT
GGATTTTAAGGTAGAGGAGGGCGAGTTTATCGCTATCATGGGGGAAAGTGGTTCTGGTAAGACGACTTTGCTCAACATTC
TAGCAACCCTGGACAAGCCGACGAGAGGCTCTGTTATCTTAAACAATCAAGACATCACCAAAATCAAGGAAAGCAAGCTG
GCAGATTTCCGTTTACGTAATCTAGGTTTTGTTTTCCAAGATTTTAATCTCTTGGATACCCTGTCCATCCAAGATAATAT
CTTTTTACCTCTGGTATTGGCACGTACTAGCTATGAGGAAATGGAAAAACGTTTGAAAGTTTTGGCGCCAAAACTGCGGA
TTCAAGATTTGCTGAAAAAACGTCCCTTTGAACTTTCTGGTGGACAAAAGCAGCGCGTGGCCATTGCCCGTAGTTTGATT
ACCCAGCCACAGATTGTCCTAGCGGACGAACCGACAGCAGCCCTAGATTACCGCAATTCGGAAGACTTGCTGAATTTGTT
TGAAGAGATTAACCGTGACGGTCAAACCATTCTCATGGTGACCCACTCGGCCAATGCAGCCAGCCACGCCAAACGCGTCC
TCTTCATCAAAGATGGTCGCATTTTCCATCAACTGTACAAGGCAGACAAGAGCAATCAAGACTTTGCCAAAGAGATTTCG
CTCAATATGTCTGCCCTGTTGGGAGGTGAGTAG

Protein sequence : 
MLLEINHLEKVYRTRFSKEETRALQDVDFKVEEGEFIAIMGESGSGKTTLLNILATLDKPTRGSVILNNQDITKIKESKL
ADFRLRNLGFVFQDFNLLDTLSIQDNIFLPLVLARTSYEEMEKRLKVLAPKLRIQDLLKKRPFELSGGQKQRVAIARSLI
TQPQIVLADEPTAALDYRNSEDLLNLFEEINRDGQTILMVTHSANAASHAKRVLFIKDGRIFHQLYKADKSNQDFAKEIS
LNMSALLGGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSUD12_0913 YP_006082476.1 peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-41 46
SSUD12_0913 YP_006082476.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 6e-39 45
SSUD12_0913 YP_006082476.1 peptide ABC transporter ATPase CP001581.1.gene598.p Protein 4e-39 42