Gene Information

Name : SSUD12_0604 (SSUD12_0604)
Accession : YP_006082173.1
Strain : Streptococcus suis D12
Genome accession: NC_017621
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 613756 - 614424 bp
Length : 669 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAACACTAATTTTTGAAAATATCAGTAAAACCTTCCAAGATGGCAGTCAAACCATTACGGCTCTTAAATCAACAAA
TTTTAGCATTGAAGAAGGCGAATTTGTTGCCATCATCGGACCGTCCGGGTCTGGGAAGTCAACATTTTTGACCTTGGCAG
GTGGTTTGCAAACACCGACAACTGGTCGTGTTTTAATCAATCAGTCGGACTATTCTGATTTACCTGAGAAAAAACGTGCC
AAATTGCGCTATAAGGACATTGGTTTTGTCTTGCAGGCTTCCAATTTGATTCCATTTTTAACAGTCGAAAAACAATTAAC
CTTGGTTGATAAGGTCAATAAGAAAGCTGAACCGAGCAAGCGAAACGAACTCCTATCTGAATTGGGTGTGGACCATCTCA
AAAACAAGTTCCCTAAGGATTTGTCAGGCGGAGAATGTCAGCGGGTAGCTATTGCCCGTGCACTTTATAACGATCCAGCC
TTGATTCTTGCTGATGAGCCGACAGCCAGTCTAGATAGTAATCGCGCTTTTGAAGTGGTTGAGTTACTAGCTAAGGAAGC
CAAAGAACGGAACAAATCCATCATCATGGTAACACATGACCATCGCATGATTGAAAAATGCGACAAGGTATATGAGATGA
AAGATGGTGTCCTCACTCAAGTTCGATAA

Protein sequence : 
MKTLIFENISKTFQDGSQTITALKSTNFSIEEGEFVAIIGPSGSGKSTFLTLAGGLQTPTTGRVLINQSDYSDLPEKKRA
KLRYKDIGFVLQASNLIPFLTVEKQLTLVDKVNKKAEPSKRNELLSELGVDHLKNKFPKDLSGGECQRVAIARALYNDPA
LILADEPTASLDSNRAFEVVELLAKEAKERNKSIIMVTHDHRMIEKCDKVYEMKDGVLTQVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 3e-47 51
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-53 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSUD12_0604 YP_006082173.1 ABC transporter CP001581.1.gene798.p Protein 2e-37 41
SSUD12_0604 YP_006082173.1 ABC transporter NC_012469.1.7686878. Protein 6e-31 41