|
Name : clpL (SSUD12_0370) Accession : YP_006081949.1 Strain : Streptococcus suis D12 Genome accession: NC_017621 Putative virulence/resistance : Virulence Product : putative ATP-dependent protease ATP-binding subunit ClpL Function : - COG functional category : - COG ID : - EC number : - Position : 379897 - 381996 bp Length : 2100 bp Strand : + Note : - DNA sequence : ATGAACAACAATTTCAATAACTTTAACAATATGGACGATATTTTCAATCAACTCATGGGCAACATGGGGGGCTACAGCAC AGAACGTCGCCGTTATTCTATCAATGGGCGTGAAGTGACACCAGAAGAATTTGCTATGTACCGTCAGACTGGTCGCTTGC CACAGACAGAAGAAGTGGCTCAAATACAGGTTAAAGGTCAGATAAAGTCAGACGGAATTCTTGTAAAACTGGGGCGCAAT TTGACCCAAGATGCGCGTGAAGGTAAGTTGGATCCAGTCATTGGACGCAACAAGGAAATCCAAGAAACATCGGAAATTTT GGCTCGTCGTACGAAAAATAATCCTGTTTTGGTTGGTGATGCTGGTGTTGGTAAAACTGCGGTAGTAGAAGGATTGGCTC AAGCCATTGTCAATGGTGATGTGCCAGCAGCCATTAAGAACAAGGAAATCATCTCCATCGACATTTCAGGCTTAGAAGCT GGGACTCAGTATCGTGGAGCTTTTGAGGAAAATGTGCAAAATCTTGTGGATGAAGTCAAAAAAGCAGGAAATATCATTCT CTTCTTTGATGAAATTCATCAGATTTTGGGAGCTGGTAGCACTGGTGGGGACTCAGGTTCCAAGGGCTTAGCGGATATTC TCAAACCAGCTTTATCCCGTGGGGAATTGACGGTTATCGGTGCTACTACGCAGGACGAATACCGCAATACCATTCACAAG AACGCCGCTCTGGCTCGTCGCTTCAATGAAGTCAAGGTTAATGCTCCGTCCGCAGAGGACACCTACCAGATTTTGAAAGG AATCAAGCCGCTTTACGAAGCCCACCACAATATTGAATTGCCAGATGAAGTTTTGAGAGCTGCGGTTGATTATTCCGTCC AATATATTCCACAACGTAGCTTACCTGATAAGGCTATTGACCTGATCGATGTGACCGCTGCACACTTGGCTGCACAACAT CCTGTGACAGATATTCAGACCTTAGAAGCAGAAATGGCTGAGGCAAAACAGTTGCAGTTGGAAGCAGCTGAAAAAGAGGA TTATGAAAAAGCCTTGAATGAAAAAGTCCGTATTGATAAGCTACAAAAACAGATTGATAATCATACGGAGCAACAGAAAG TGGTGGCGACCGTTAATGATGTGGCTCAGGCGGTTGAGCGGATGACAGGAATTCCAGTCTCACAAATGGGAGCTTCTGAC ATTGAACGACTCAAGGAATTGAAAAATCGTCTGGCAGCTAACGTTATTGGTCAAGACGATGCGGTGGAAGCTGTATCTCG TGCCATTCGTCGGAATCGTGCAGGTTTTGATGACGGCAACCGTCCGATTGGTTCCTTCCTCTTTGTCGGTCCGACAGGTG TGGGTAAGACAGAGTTGGCAAAACAGTTAGCGCTAGACTTGTTTGGTAACAAGGATGCCATTATTCGTTTGGATATGTCG GAATACAGCGATCGGACAGCCGTTTCCAAATTAATCGGTACCACAGCTGGCTACATTGGCTACGATGACAATTCCCATAC TCTTACCGAGCGCGTCCGCCGCAATCCGTACTCAATCGTTCTTCTGGATGAGATTGAAAAAGCTGATCCACAAGTGATTA CCCTTCTCTTGCAAGTGCTAGATGACGGGCATTTGACTGATGGACAGGGCAACCAAGTTAACTTTAAAAATACCATTATT ATCGCGACTTCTAATGCTGGTTTTGGTTATGGAATGGCAGAAGGTGAAGAAAATCAAGACATCATGGACCGTATCGCACC ATTCTTCCGTCCGGAGTTCCTTAATCGTTTTAACGCAGTTATCGAATTCAAGCACTTGGATAAAGGTGATCTCAAAGCCA TTGTAGAATTACTCTTGGCCCAGGTCAATAATACCCTGGCGAAGAAAGGCATCCAATTAACGGTAACGGAAGCTGCCAAA GAATTCTTGATGGAAGAAGGCTATGACAAGGCCATGGGAGCTCGTCCTCTGCGCCGTGTGATTGAAAATCAGATTCGAGA CAAGGTAACAGATTACTATTTGGATCATGTTGATGTCAAATATCTGGAAGCGGATGTGGTTGATGGAAGCATCCAAATAA AAGAGCAAAGCTTTGCTTAA Protein sequence : MNNNFNNFNNMDDIFNQLMGNMGGYSTERRRYSINGREVTPEEFAMYRQTGRLPQTEEVAQIQVKGQIKSDGILVKLGRN LTQDAREGKLDPVIGRNKEIQETSEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEA GTQYRGAFEENVQNLVDEVKKAGNIILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTIHK NAALARRFNEVKVNAPSAEDTYQILKGIKPLYEAHHNIELPDEVLRAAVDYSVQYIPQRSLPDKAIDLIDVTAAHLAAQH PVTDIQTLEAEMAEAKQLQLEAAEKEDYEKALNEKVRIDKLQKQIDNHTEQQKVVATVNDVAQAVERMTGIPVSQMGASD IERLKELKNRLAANVIGQDDAVEAVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGNKDAIIRLDMS EYSDRTAVSKLIGTTAGYIGYDDNSHTLTERVRRNPYSIVLLDEIEKADPQVITLLLQVLDDGHLTDGQGNQVNFKNTII IATSNAGFGYGMAEGEENQDIMDRIAPFFRPEFLNRFNAVIEFKHLDKGDLKAIVELLLAQVNNTLAKKGIQLTVTEAAK EFLMEEGYDKAMGARPLRRVIENQIRDKVTDYYLDHVDVKYLEADVVDGSIQIKEQSFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-131 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpL | YP_006081949.1 | putative ATP-dependent protease ATP-binding subunit ClpL | VFG0080 | Protein | 1e-147 | 48 |
| clpL | YP_006081949.1 | putative ATP-dependent protease ATP-binding subunit ClpL | VFG0079 | Protein | 7e-138 | 45 |
