Gene Information

Name : SSUD12_2010 (SSUD12_2010)
Accession : YP_006083521.1
Strain : Streptococcus suis D12
Genome accession: NC_017621
Putative virulence/resistance : Virulence
Product : amino acid ABC transporter, ATP-binding protein, putative
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2014504 - 2015133 bp
Length : 630 bp
Strand : +
Note : -

DNA sequence : 
ATGATTCATTTAGAACATATCTTTAAAAAGATTGGTCAAAAACATATCCTACATGATTTTTCCCTCAACATTGAACAAGG
TGAACTAGTCGCAATTGTTGGAAAAAGTGGTAGCGGAAAAACAACATTACTAAACATCATTGGCTTGCTTGACGGTGAAT
ACGAAGGAAATTACCTCCTATTTGGTCATTCAAACGTACCTGTAAACACTAGGACATCTCAAAAAATAATTCGGGAACAA
ATTTCCTATCTATTCCAAAATTTTGCTCTAATTGAGAACGAAAGCGTCGAGTATAATCTCCTGATGGCATTAAAATATAC
TAGATTATCAAAAAAGGAAAAGGAAGAGTCCATAAAAAATATACTAGAAAAAATCGGACTAGCAAACACGCTAAAACAAA
AAATTTCCGAGCTGTCTGGAGGAGAACAACAGCGAATTGCTATCGCTCGTGCTCTACTCAAACCAAGCAATCTTATCTTG
GCAGATGAGCCAACGGGATCATTAGATCAGGAAAATAGGGACTTAATCCTGCAATTTCTCATAGAAATGAATAATAGTGG
AAAAACAGTAATTATCGTCACACACGATCCATATATTGCCGATAAGTGTCAGCGGATTGTTCGTTTATGA

Protein sequence : 
MIHLEHIFKKIGQKHILHDFSLNIEQGELVAIVGKSGSGKTTLLNIIGLLDGEYEGNYLLFGHSNVPVNTRTSQKIIREQ
ISYLFQNFALIENESVEYNLLMALKYTRLSKKEKEESIKNILEKIGLANTLKQKISELSGGEQQRIAIARALLKPSNLIL
ADEPTGSLDQENRDLILQFLIEMNNSGKTVIIVTHDPYIADKCQRIVRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 6e-56 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSUD12_2010 YP_006083521.1 amino acid ABC transporter, ATP-binding protein, putative NC_012469.1.7686946. Protein 2e-63 67
SSUD12_2010 YP_006083521.1 amino acid ABC transporter, ATP-binding protein, putative CP003583.1.gene613.p Protein 4e-33 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSUD12_2010 YP_006083521.1 amino acid ABC transporter, ATP-binding protein, putative VFG0869 Protein 3e-22 41