Gene Information

Name : SSUD12_1651 (SSUD12_1651)
Accession : YP_006083173.1
Strain : Streptococcus suis D12
Genome accession: NC_017621
Putative virulence/resistance : Unknown
Product : IS200 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1647590 - 1648054 bp
Length : 465 bp
Strand : -
Note : -

DNA sequence :
ATGGCGCAAAAGGCACATAGTTTATCACATACAAAGTGGCTGTGTAAATACCACATTGTCTTCACACCTAAGTATAGACG
AAAAATCATCTATAATCAATATCGAAGTAGTTTGGGAGAAATATTCCGACGTTTGTGTACTTATAAAGGCGTAGAAATTA
TCGAAGGACATCTGATGCCGGATCATGTTCATATGTTAGTCAGTATTCCTCCGCGATTAAGTGTATCAAGCTTTATGGGA
TATTTAAAAGGTAAGAGTGCTCTAATGATGTTTGATAAACACGCCAATCTCAAATACAAATTTGGTAATCGTCATTTCTG
GGCAGAGGGATATTATGTAAGTACGGTTGGACTAAATGAAGCCACAATTAAGAAATATATACAAGAACAGGAAAAACATG
ATATAGCACTTGATAAGTTGAGTGTAAAAGAGTATGAAGATCCCTTTAGGGATAATGGCAAGTAG

Protein sequence :
MAQKAHSLSHTKWLCKYHIVFTPKYRRKIIYNQYRSSLGEIFRRLCTYKGVEIIEGHLMPDHVHMLVSIPPRLSVSSFMG
YLKGKSALMMFDKHANLKYKFGNRHFWAEGYYVSTVGLNEATIKKYIQEQEKHDIALDKLSVKEYEDPFRDNGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 1e-41 65
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 2e-41 65
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 6e-44 62
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 1e-40 59
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 2e-36 54