Gene Information

Name : SSUD12_1393 (SSUD12_1393)
Accession : YP_006082923.1
Strain : Streptococcus suis D12
Genome accession: NC_017621
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1401312 - 1402817 bp
Length : 1506 bp
Strand : -
Note : -

DNA sequence :
ATGAACAAACGTGTTAAAATTGTTGCAACCCTTGGTCCAGCGGTAGAAATCCGCGGTGGTAAAAAATTCGGTGACGATGG
TTACTGGGGTGAAAAATTAGATGTTGAGTCATCAGCACAGAAAATCGCTGCTTTGATTACAGAAGGTGCCAATGTTTTCC
GTTTCAACTTCTCACACGGTGACCACCAAGAGCAAGGTGATCGTATGGCAACAGTTCGTCGTGCAGAAGAAATCGCTGGT
AAAAAAGTAGGTTTCTTGTTGGATACAAAAGGTCCAGAAATCCGTACAGAATTGTTTGAAGATGATGCAAAAGAATACGC
ATATACAACTGGTGACAAATTGCGTGTTGCTACAAAACAAGGTATCAAATCTACAAAAGAAGTGATTGCTTTGAACGTAG
CAGGTGGTTTGGATGTCTTTGACGATGTTGAAGTTGGTAAGCAAATCCTTGTTGACGATGGTAAACTTGGTTTGACAGTT
GTTGAAAAAGATGCAGTAAACCGTGAATTTGTTGTTTTGGTTGAAAACGACGGTGTAATTGCTAAACAAAAAGGTGTAAA
CATCCCTTACACAAAAATTCCTTTCCCAGCTCTTGCAGAGCGTGATAATGCAGATATCCGCTTCGGTCTTGAGCAAGGTT
TGAACTTTATTGCTATCTCATTTGTACGTACTGCAAAAGACGTAGAAGTTGTTCGTAATATCTGTAAAGAAACTGGTAAC
GACCACGTTCAATTGTTTGCGAAAATCGAAAACCAACAAGGTATCGACAACATTGACGAAATCATCGAAGCAGCAGATGG
TATCATGATTGCTCGTGGTGACATGGGTATCGAAGTACCATTCGAAATGGTTCCAGTTTACCAAAAAATGATTATCACTA
AAGTGAATGCAGCTGGTAAAGCAGTTATCACAGCAACAAACATGTTGGAAACAATGACTGAAAAACCACGTGCAACTCGT
TCAGAAGTATCTGACGTATTCAACGCAGTTATCGACGGTACTGACGCAACAATGCTTTCGGGTGAGTCTGCAAACGGTAA
ATATCCAGTAGAATCAGTTCGTACAATGGCAACTATCGCTAAAAACGCACAGACTCTTCTTAATGAATATGGTCGTTTGA
ACTCTGATCACTTTAACCGTGCATCTAAAACAGAAGTTATTGCATCTGCAGTAAAAGATGCTTGTCACTCAATGAACATC
AAGTTGGTTGTAACAGTTACTGAAACTGGTTACTCAGCTCGTTCAATCTCTAAATACCGTCCAGATGCTGACATCTTGGC
AGTAACATTTACTGAGAAAGTACAAAAATCATTGATGCTCAACTGGGGTGTTATCCCAGTTGTAACAAACCGTCCAGATT
CAACTGACGATATGTTTGATTTGGCTGAACGCATTGCCAAAGAGCAAGGTCTTGTTGAAGCAGGAGATGATATTATTATC
GTTGCTGGTGTGCCTGTAGGTGTTGCAGGTTCAACAAACACTATGCGTGTTCGTACAGTAAAATAA

Protein sequence :
MNKRVKIVATLGPAVEIRGGKKFGDDGYWGEKLDVESSAQKIAALITEGANVFRFNFSHGDHQEQGDRMATVRRAEEIAG
KKVGFLLDTKGPEIRTELFEDDAKEYAYTTGDKLRVATKQGIKSTKEVIALNVAGGLDVFDDVEVGKQILVDDGKLGLTV
VEKDAVNREFVVLVENDGVIAKQKGVNIPYTKIPFPALAERDNADIRFGLEQGLNFIAISFVRTAKDVEVVRNICKETGN
DHVQLFAKIENQQGIDNIDEIIEAADGIMIARGDMGIEVPFEMVPVYQKMIITKVNAAGKAVITATNMLETMTEKPRATR
SEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATIAKNAQTLLNEYGRLNSDHFNRASKTEVIASAVKDACHSMNI
KLVVTVTETGYSARSISKYRPDADILAVTFTEKVQKSLMLNWGVIPVVTNRPDSTDDMFDLAERIAKEQGLVEAGDDIII
VAGVPVGVAGSTNTMRVRTVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 8e-65 43
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 5e-65 43
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-64 43
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 8e-65 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSUD12_1393 YP_006082923.1 pyruvate kinase VFG0479 Protein 3e-65 43