Gene Information

Name : cps2E (SSUD12_1365)
Accession : YP_006082899.1
Strain : Streptococcus suis D12
Genome accession: NC_017621
Putative virulence/resistance : Virulence
Product : galactosyl transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1371073 - 1371675 bp
Length : 603 bp
Strand : -
Note : -

DNA sequence : 
ATGTATCCAATTTGTAAACGTATTTTAGCAATTATTATCTCAGGGATTGCTATTGTTGTTCTGAGTCCAATTTTATTATT
GATTGCATTGGCGATTAAATTAGATTCTAGAGGTCCGGTACTATTTAAACAAAAACGAGTTGGTAAAAACAAGTCATACT
TTATGATTTATAAATTCCGTTCTATGTACGTTGACGCACCAAGTGATATGCCGACTCATCTTTTGAAGGATCCTACAGCG
ATGATTACAAAAGTAGGAGCTTTTCTACGAAAGACTAGTCTCGATGAATTACCTCAGCTATTCAATATTTTCAAAGGAGA
AATGGCCATTGTTGGTCCACGTCCAGCCCTGTGGAATCAATACGATTTGATTGAGGAGCGAGATAAATATGGTGCAAATG
ATATTCGTCCTGGACTAACCGGTTGGGCTCAAATTAATGGTCGTGATGAATTGGAAATTGATGAAAAGTCAAAATTGGAT
GGATATTATGTTCAAAATATGAGTCTAGGTTTGGATATTAAATGTTTCTTAGGTACATTCCTCAGTGTAGCCAGAAGTGA
AGGTGTTGTTGAAGGTGGAACAGGGCAGAAAGGAAAAGGATGA

Protein sequence : 
MYPICKRILAIIISGIAIVVLSPILLLIALAIKLDSRGPVLFKQKRVGKNKSYFMIYKFRSMYVDAPSDMPTHLLKDPTA
MITKVGAFLRKTSLDELPQLFNIFKGEMAIVGPRPALWNQYDLIEERDKYGANDIRPGLTGWAQINGRDELEIDEKSKLD
GYYVQNMSLGLDIKCFLGTFLSVARSEGVVEGGTGQKGKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 3e-33 54
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 9e-33 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cps2E YP_006082899.1 galactosyl transferase VFG1369 Protein 2e-43 65
cps2E YP_006082899.1 galactosyl transferase VFG1309 Protein 2e-33 53