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Name : SSUD12_1332 (SSUD12_1332) Accession : YP_006082868.1 Strain : Streptococcus suis D12 Genome accession: NC_017621 Putative virulence/resistance : Virulence Product : Type IV secretory pathway,VirD4 component Function : - COG functional category : - COG ID : - EC number : - Position : 1344296 - 1346113 bp Length : 1818 bp Strand : - Note : - DNA sequence : ATGTATTCCAGGCAAAAAGCATTTGTCTTTGGCCTCTTGGGTCTCGCCCTTGGCTATTTCTGCCATCGTCTAACCCTACT CTATGATGGTTTAACCAATGCTCCACCTATGGAACGTTTTGCCTACCTCTTAGGAGAGGGGTTAAATCAGGTTTTCAATC CTTTATGGCTATTTTCCTTTACTCAAAAATCTCTACTTGCCTTTATCCTAGGGGTTCTAACGATGATGTTAGTCTATCTT TATGTATCGACAGGACAGAAGGTCTATCGAGAAGGGGAAGAATACGGTTCTGCCCGATTTGGAACCAGTAAGGAAAAGCG ATACTTTTACAGTAAGAATCCTTTCAATGACACGATTTTGGCTCGTGATGTTCGTCTAACCTTGTTGGAAAAGAAGAAGC CACAGTTTGACCGAAATAAAAACTTGATTGTCATTGGGGGTTCTGGGGCAGGTAAGACCTTTCGTTTTGTTAAACCCAAC CTTATCCAACTTAACTGTTCCAATATTGTCGTAGATCCTAAAGACCATTTGGCTGAGAAGACAGGTAAACTCTTTTTGGA AAACGGTTATCAGGTCAAGGTTTTAGATCTGGTTAATATGACCAATTCAGACGGTTTTAATCCCTTTCGTTATGTTGAGA CAGAAAATGATTTGAACCGCATGTTAACGGTCTATTTTAATAATACGAAAGGAAATGGTTCTCGTAGTGATCCTTTTTGG GACGAGGCTTCCATGACCTTGGTGCGAGCCATTGCTTCTTACTTGGTGGATTTTTACAATCCTCCAGGTAGTTCAAAACA AGAACAGGAATCAAGACGCAAGCGTGGTCGCTATCCAGCCTTTTCAGAGATTGGGAAACTCATCAAACTCTTATCAAAGG GAGACAATCAGGACAAAAGTGTACTTGAAGTCCTGTTTGAAGACTATGCTAAAAAATACGGTCACAAAAACTTTACCATG CGAAATTGGGCGGATTTCCAAAACTATAAGGATAAGACGTTGGATTCGGTGATTGCGGTCACAACAGCTAAATTTGCCCT TTTTAATATTCAATCGGTGATTGATTTAACGCATCGAGATACCCTGGATTTGAAAACATGGGGAACGCAGAAAACTATGG TCTATCTTGTTATTCCAGACAATGATACGACCTTTCGTTTCCTATCTGCTTTATTTTTCTCTACGGTTTTCTCCACTTTG ACCAGACAGGCTGATGTTGACTTTAAAGGGCAACTGCCGATTCATGTTAGAAGCTATCTGGATGAGTTTGCGAATGTCGG AGAAATCCCAGACTTTGCCGAACAAACCTCAACAGTTCGCTCTAGGAACATGAGTTTAGTTCCAATCTTGCAAAATATTG CCCAACTTCAAGGACTATATAAGGACAAAGAGGCATGGAAAACCATTTTGGGGAACTGTGACAGTCTCTTATATTTGGGT GGGAATGATGAGGAAACCTTTAAGTTTATGAGTGGACTTCTAGGTAAACAAACCATTGATGTCAGAAGTACCAGTCGTTC TTTTGGGCAGACTGGCTCAAGTTCTACCTCTCACCAGAAAATTGCTCGTGACTTGATGACAGCAGATGAAGTAGGAAATA TGAAACGAGATGAATGTCTCGTACGCATTGCAGGAGTTCCTGTTTTTCGGACCAAGAAATATTTCCCACTCAAACACAAA CATTGGAAGTTGCTCGCTGATAAGGAAACCGATGACCGTTGGTGGAACTATCACATCAATCCCTTGGCTAAAGAGGAAGA ATTGGACTTGTCAGACTATCAAATAAGGGATTTAAGCACAGAAACGTCACTACATTAA Protein sequence : MYSRQKAFVFGLLGLALGYFCHRLTLLYDGLTNAPPMERFAYLLGEGLNQVFNPLWLFSFTQKSLLAFILGVLTMMLVYL YVSTGQKVYREGEEYGSARFGTSKEKRYFYSKNPFNDTILARDVRLTLLEKKKPQFDRNKNLIVIGGSGAGKTFRFVKPN LIQLNCSNIVVDPKDHLAEKTGKLFLENGYQVKVLDLVNMTNSDGFNPFRYVETENDLNRMLTVYFNNTKGNGSRSDPFW DEASMTLVRAIASYLVDFYNPPGSSKQEQESRRKRGRYPAFSEIGKLIKLLSKGDNQDKSVLEVLFEDYAKKYGHKNFTM RNWADFQNYKDKTLDSVIAVTTAKFALFNIQSVIDLTHRDTLDLKTWGTQKTMVYLVIPDNDTTFRFLSALFFSTVFSTL TRQADVDFKGQLPIHVRSYLDEFANVGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKDKEAWKTILGNCDSLLYLG GNDEETFKFMSGLLGKQTIDVRSTSRSFGQTGSSSTSHQKIARDLMTADEVGNMKRDECLVRIAGVPVFRTKKYFPLKHK HWKLLADKETDDRWWNYHINPLAKEEELDLSDYQIRDLSTETSLH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0973 | YP_001198339.1 | Type IV secretory pathway, VirD4 component | Virulence | 89K | Protein | 0.0 | 96 |
| SSU98_0987 | YP_001200545.1 | Type IV secretory pathway, VirD4 component | Virulence | 89K | Protein | 0.0 | 96 |
| traG | YP_006309931.1 | TraG/TraD family protein | Not tested | FWisland_1 | Protein | 0.0 | 76 |
