Gene Information

Name : SSUD12_1307 (SSUD12_1307)
Accession : YP_006082843.1
Strain : Streptococcus suis D12
Genome accession: NC_017621
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1309039 - 1309953 bp
Length : 915 bp
Strand : -
Note : -

DNA sequence :
ATGGATATACATTTAAATCATATAAGTAAGAAATATGGTAATCGAATCATTTTAAACGATGTCACTATTAGGATTCCTTC
AGGGAAAATTTATGGGTTTATTGGTGCTAATGGAGCTGGTAAAACTACAACGATGAAAATCCTTACTGGATTATTACCTG
CTACAAAAGGTAACATATACTTTGACGGTGTAAGTCTTAACGACTTAAAAAATCAGGAGTCAATAATAGGAGCTTTTATT
AGTACACCAAGTTACTATAAAAACTTAACAGCTTATGAAAACTTAGCTATTATACAAGAAGTTCTCAAAAAACCGCAAGA
AGAAATTGAGCGAGTTTTGAATCTGGTGGGCCTAAGTGAAGTTCGCAATAAAGTTGTGTCTTCATTCTCATTTGGTATGA
AACAACGTCTTGGTTTAGCATTTGCTTTTTTAAATAATCCAGATATATTGGTATTAGATGAACCTACGAATGGATTAGAT
CCGAAAGGAATTGTTGAAATCAGAGAACTCTTATACAGACTAGCTAAAGAAGAAGGAAAAACGATTTTTATATCAAGTCA
CCATATTAGTGAAATAGAAACGATTGCAGATATGGTCGGTATAATACATGACGGTGAGCTTATTTTTGAGGGAACACTCT
CTGAACTTTATAATAAAAGGGACAGCTCTTATCTTTTTGAAGTCGCAAATCCAGATGTTTTTGAACATATTTTGAAAGTT
CGAGATATCTCATTTATTCGAAAAGAATCACATTTTGAAATAAATTCTTACAAAAAAGATATACCAAATTTAATAAAATT
CATTGTACAAGAAGGAATCGATATTTTGGAGGTTTCACCAAATAAAAACCTAGAAAGAATCTTCTTAGACTTAACGAAAG
GAGATAAAGTGTATGGTCACATTGATAAAAAATGA

Protein sequence :
MDIHLNHISKKYGNRIILNDVTIRIPSGKIYGFIGANGAGKTTTMKILTGLLPATKGNIYFDGVSLNDLKNQESIIGAFI
STPSYYKNLTAYENLAIIQEVLKKPQEEIERVLNLVGLSEVRNKVVSSFSFGMKQRLGLAFAFLNNPDILVLDEPTNGLD
PKGIVEIRELLYRLAKEEGKTIFISSHHISEIETIADMVGIIHDGELIFEGTLSELYNKRDSSYLFEVANPDVFEHILKV
RDISFIRKESHFEINSYKKDIPNLIKFIVQEGIDILEVSPNKNLERIFLDLTKGDKVYGHIDKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 4e-131 99
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 4e-131 99
cdd4 CAA63569.1 - Not tested PaLoc Protein 5e-43 42
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 1e-31 41
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 8e-32 41
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 4e-38 41