Gene Information

Name : SSUD12_1183 (SSUD12_1183)
Accession : YP_006082727.1
Strain : Streptococcus suis D12
Genome accession: NC_017621
Putative virulence/resistance : Unknown
Product : phage related DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1196625 - 1198001 bp
Length : 1377 bp
Strand : -
Note : -

DNA sequence :
ATGAAATTGACATTACATAACTATCAAGTAGTCGCCAAGGACTTCATCATAAGTCACCCTAATGCAGCGGTCATCTTAGA
CATGGGGATGGGAAAGACAGCTACAACCTTGTCTGCGGTGAATGAGCTGATGTTTGATAGGTTTGAAGTCGCTAAGGTTT
TGGTCATTGCCCCACTTCGTGTTGCAAACACGGTCTGGAGTGACGAGATTGAGCAATGGGCGGAGTTGCGTCACTTACGG
TATTCGAAAATCGTGGGTACTCCCAAGCAACGAAAAGTAGCTCTTCAGAAAGATGCGGATATCTATATCGTCAATCGTGA
AAACCTCCCTTGGTTGGTGGAACAATGTAGTCCCTATTTTAAGTGGGATATGGTAGTGATTGATGAATTGAGTTCTTTCA
AGTCTTGGCAGTCCAAACGCTTCAAAGCTTTCATGGCAATGCGTCCTTACATGAAACGTATCGTTGGTTTGACTGGAACA
CCTAGTTCAAACGGACTAATGGACTTGTTCGCTGAGTTTAAAGTCATTGACGGAGGAGAACGTCTTGGTCGATTCATTGG
TGAGTTTCGTAGTCGCTACTTTGAAGAAGGTCGTCGCAATGGAAACATTGTCTATGAATACATCCCTATGGATTATGCGG
AGTGTCAAATTCAGGACAAGATTAGTGATATTACCATTTCCATGAAGGCTCTAGATTATCTAGATATGCCTGATTTGATT
TCAACCAAGAAGCTGGTGCGTATGTCAGAAAAGGAAAAAGAAAAGTACAGTCAGTTTAAGAAAGAGTATGTTTTATCAGA
GTTGGATGGATTAGAAGTAACTGCTGCCAATGCAGCAAGTCTTACGAACAAGCTAGTTCAGTTGTCCAATGGTGCTGTAT
ATTCTGATGATCATACAGTCGTGCCGCTTCATGAACAGAAACTAGATGCCCTAGAAGATATCCTTGAATCCGCAAATGGA
GAAACTGTCTTAGTGGCCTATTGGTTCAAACATGACTTGGCTCGGATTATTGGTCGTTTAGAAAAACTCAAGGTGAAGAG
TCGGGTGTTGAAAACAGAAGAAGATATTCGCGAGTGGAACAAGGGAAATGTTCCAGTTGGCTTACTTCATCCAGCTGGTG
CAGGTCATGGGTTGAACCTTCAAAAAGGCGGTCACCACTTGGTCTGGTTTGGATTAACGTGGTCATTGGAATTATACCAA
CAAACGAATGCACGACTTTGGCGTCAAGGCCAGGAGGCTGAGACAGTTGTTATCCAACACATTGTGACTGAAGGAACGAT
TGATGAGGAAATCCTCAAGGCACTAGAAAACAAAGATGCACAACAAGAACGGCTGATTGCAGCTGTAAAAGCACAAGTAG
GAGGGGCAGATGGATAA

Protein sequence :
MKLTLHNYQVVAKDFIISHPNAAVILDMGMGKTATTLSAVNELMFDRFEVAKVLVIAPLRVANTVWSDEIEQWAELRHLR
YSKIVGTPKQRKVALQKDADIYIVNRENLPWLVEQCSPYFKWDMVVIDELSSFKSWQSKRFKAFMAMRPYMKRIVGLTGT
PSSNGLMDLFAEFKVIDGGERLGRFIGEFRSRYFEEGRRNGNIVYEYIPMDYAECQIQDKISDITISMKALDYLDMPDLI
STKKLVRMSEKEKEKYSQFKKEYVLSELDGLEVTAANAASLTNKLVQLSNGAVYSDDHTVVPLHEQKLDALEDILESANG
ETVLVAYWFKHDLARIIGRLEKLKVKSRVLKTEEDIREWNKGNVPVGLLHPAGAGHGLNLQKGGHHLVWFGLTWSLELYQ
QTNARLWRQGQEAETVVIQHIVTEGTIDEEILKALENKDAQQERLIAAVKAQVGGADG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1779 YP_253694.1 hypothetical protein Not tested ¥ÕSh1 Protein 4e-89 50
SEQ_2070 YP_002747285.1 SNF2 family phage protein Not tested ¥ÕSeq4 Protein 4e-78 49
SAUSA300_1408 YP_494105.1 phage helicase Not tested ¥ÕSa2 Protein 2e-83 49
MW1405 NP_646222.1 hypothetical protein Not tested ¥ÕSa2 Protein 4e-86 49
SAOV_0314 YP_005735831.1 putative DNA helicase Not tested ¥ÕSa1 Protein 9e-87 49