Gene Information

Name : SSUD9_0602 (SSUD9_0602)
Accession : YP_006080087.1
Strain : Streptococcus suis D9
Genome accession: NC_017620
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 588105 - 588806 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGTCCTATATCCAAGTAAAGAATTCGTCAAAATACTACCAAATGGGGGATGCGACCATTGTGGCCAATGATGGTGTGTC
CTTTGAGATTGAGCAGGGTGAGCTGGTCATCATTCTGGGTTCATCTGGTGCGGGCAAATCCACTCTGCTCAATATCTTAG
GTGGCATGGATAGCAACGATGAGGGTGAGGTTTGGATTGACGGTGTGGATATTGCCAAGCTTTCAAGTCATGAATTGACC
AATTATCGTAGAGATGATGTAGGTTTTGTATTTCAATTTTATAACTTGGTTGCCAATCTGACCGCCAAGGAAAATGTGGA
ACTGGCAGCAGAAATCGTCAAGGATGCCTTGGATGCCGAGGAAGTCTTGGAACAGGTCGGACTCGGTCACCGAATCAATA
ATTTCCCTGCTCAGCTTTCAGGCGGTGAACAACAACGTGTGGCCATTGCCCGTGCGGTTGCAAAAAAGCCTAAAATTTTG
CTTTGCGATGAACCAACTGGCGCTCTGGACTACCAAACAGGTAAGCAGGTCTTACAAATCCTACAAGATATGTCCCGCAC
ACAAGGGACAACGGTGATTATCGTGACCCACAATAGCTCTCTGGCTCCTATTGCAGATAGGGTCATTCGGATGCGGGACG
CCCGTGTGCACTCTGTTGAGTTACACGCAGAACCACAGGATATTGCAAGCCTAGAATATTAG

Protein sequence : 
MSYIQVKNSSKYYQMGDATIVANDGVSFEIEQGELVIILGSSGAGKSTLLNILGGMDSNDEGEVWIDGVDIAKLSSHELT
NYRRDDVGFVFQFYNLVANLTAKENVELAAEIVKDALDAEEVLEQVGLGHRINNFPAQLSGGEQQRVAIARAVAKKPKIL
LCDEPTGALDYQTGKQVLQILQDMSRTQGTTVIIVTHNSSLAPIADRVIRMRDARVHSVELHAEPQDIASLEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSUD9_0602 YP_006080087.1 ABC transporter NC_012469.1.7685735. Protein 3e-86 77
SSUD9_0602 YP_006080087.1 ABC transporter CP001581.1.gene598.p Protein 1e-39 42
SSUD9_0602 YP_006080087.1 ABC transporter CP001581.1.gene798.p Protein 2e-38 42
SSUD9_0602 YP_006080087.1 ABC transporter NC_012469.1.7686878. Protein 3e-37 42
SSUD9_0602 YP_006080087.1 ABC transporter NC_008702.1.4606598. Protein 7e-34 42