Gene Information

Name : SSUD9_0559 (SSUD9_0559)
Accession : YP_006080046.1
Strain : Streptococcus suis D9
Genome accession: NC_017620
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 542122 - 542961 bp
Length : 840 bp
Strand : +
Note : -

DNA sequence :
ATGGTCGCAGAAGGATTTCGACTAGATGTACTACTGACGATTGCTCAATTAGTTCCTTCTACCTATCATTATCAAGTCAA
ACAACTGGACAAACCAGATAAAGATAAGGACTTAAAAGCTGAAATTCAAGCCATTTATGATGAAAATAAGGGAAATTATG
GCTACCGTCGCATTCACCTTGAGCTAAGAAATCGTGGATTTTCTGTCAACCACAAGAAAGTACAACGGCTGATGAAAGAG
TTAGGTTTGACTGCTCGTATTCGTAGACGCAAGAGATACAAGTCTTACAAGGGTGATGTGGGCAAGAAAGCTCCTAATCT
CATTGAGAGAGCCTTTGAAGGGGCTAAGCCTTTTGAGAAGTGCTATACAGATGTGACTGAGTTCGCTCTGCCAAATTGTG
CTGAAAAACTCTATCTTTCTCCAGTTCTGGATGGCTATAATAGCGAAATTATTGATTTTACCTTATCCCGCTCTCCAAAC
CTCATACAAGTCAAGACCATGCTTGAGAAGGTCTTTCCTGAGGAAACTTACCCAAATACCATTCTCCATAGTGACCAAGG
TTGGCAATACCAACATGAAGTCTATCACCGTTTTCTTGCAAGTAAAGGCATACGTCCTTCCATGTCTCGCAAGGGAACCA
GCACAGATAATAGCATGATGGAATCCTTCTTTGGCGTCTTGAAAACAGAAATGTTTTACGGATTTGAGAAAAATTTCAAG
TCTCTGGATCAACTGGAGCAAGCTATCACCGAGTATATTTTTTACTACAACAATAAACGCATTAAAACAAAACTAAAAGG
ACTTAGTCCTGTTCAGTACAGAACTAAATCCTTTCAATAA

Protein sequence :
MVAEGFRLDVLLTIAQLVPSTYHYQVKQLDKPDKDKDLKAEIQAIYDENKGNYGYRRIHLELRNRGFSVNHKKVQRLMKE
LGLTARIRRRKRYKSYKGDVGKKAPNLIERAFEGAKPFEKCYTDVTEFALPNCAEKLYLSPVLDGYNSEIIDFTLSRSPN
LIQVKTMLEKVFPEETYPNTILHSDQGWQYQHEVYHRFLASKGIRPSMSRKGTSTDNSMMESFFGVLKTEMFYGFEKNFK
SLDQLEQAITEYIFYYNNKRIKTKLKGLSPVQYRTKSFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 5e-91 77
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 5e-91 76
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 1e-47 50
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 4e-51 48
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 8e-33 42
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 1e-33 42