Gene Information

Name : SSUD9_1668 (SSUD9_1668)
Accession : YP_006081090.1
Strain : Streptococcus suis D9
Genome accession: NC_017620
Putative virulence/resistance : Resistance
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1646958 - 1647608 bp
Length : 651 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAAGGATTTTGGTTGTAGAGGATGACATAGTTATTAGTCAAGTTGTTTGTGAGTTTTTAAAAGAACATGGTTATCA
GGTAGAATCTGTTTTTGATGGAAAGGTTGCTTTAGAAAGGTTTCAAGAAGAACAATTCGATTTAATTGTTTTAGATATCA
TGATTCCATCTATGACAGGTTTGGAAGTACTGAAGGAAATTCGCAAAACTTCTCAGATTCCAATTTTGATGCTGACAGCC
ATGGGTGACGAATATACACAGCTTATTAGTTTTAATCAGATTATAAGTGATTATGTTGTTAAACCATTTTCACCAACTAT
ATTGGTAAAACGGATTGAGAATATTTTGAGAGGAAAAGGAGAGACAGATAGCATTGAGATAGGAACAATTCTTATTCAAC
CAACTAGCGGGGCAGTTTATATGGAAGAAGAAGAAGTTCAATTGACGAAAAAAGAATATGAAGTTTTACTATATTTAGCT
AAACGACGTGGGAAAATTGTTAGTCGTGATAACTTGATGATGGGAATATGGGGATATACGGAATTGGATAGTCGTGTCTT
AGATAATCATATCAAGAATATCCGTAAGAAATTGCCGTCACTTCCTTTGAAGACAATAGTTGGTCGTGGTTATCAAATAG
AGGGTACTTAA

Protein sequence : 
MSRILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLEVLKEIRKTSQIPILMLTA
MGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGETDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLA
KRRGKIVSRDNLMMGIWGYTELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-40 43
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSUD9_1668 YP_006081090.1 winged helix family two component transcriptional regulator AF310956.2.orf0.gene Protein 8e-41 43
SSUD9_1668 YP_006081090.1 winged helix family two component transcriptional regulator U35369.1.gene1.p01 Protein 6e-39 41
SSUD9_1668 YP_006081090.1 winged helix family two component transcriptional regulator AE016830.1.gene2255. Protein 6e-39 41