Gene Information

Name : SSUD9_1073 (SSUD9_1073)
Accession : YP_006080522.1
Strain : Streptococcus suis D9
Genome accession: NC_017620
Putative virulence/resistance : Virulence
Product : Tn5252 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1078607 - 1080958 bp
Length : 2352 bp
Strand : -
Note : Orf26 protein

DNA sequence :
GTGAAAAAATTAAAACACTCAATGAAACCAAAGACATCTTCTAATGACCAAAAGCAAAAGAAGAAAACACAGAAGCAGGA
GATCAGACCTTCTACAGTAAATACGTTAGCCTATCAAGGGCTTTTTCAGAATGGCCTTATGCAGGTCAGTCCAAGCTATT
TCTCACAAACCTATCTTTTAGGAGATGTTAATTATCAAACAGTTGGCTTAGATGATAAGGGAGCTATCGTGGAGAAATAT
TCCGATTTAATCAATTCACTGGATGATAAGACCAATTTCCAACTGACTATTTTCAATCAAAAAGTTAATTTGGAAAAATT
TCGTAAGAGTATTCTCTATCCCTTGCAGGAAGATGGGTTTGATACTTATCGTGATGAATTGAATCGCATGATGGATGCCA
ACTTAGAGGCGGGTGAGAACAACTTTTCAGCTGTCAAGTTTCTTTCATTTGGCAAGAGCGACCAAACACCAAAACTAGCT
TTTCGTTCTCTGTCACAGATTGGGGAATATTTCAAGAGTGGCTTTTCAGAGATTGATGTATCTCTTGGTTTACTTGGTGG
AGAGGAGCGAGTGAATGTCCTTGCGGATATATTACGAGGTGAAAATCATTTACCGTTTTCTTACAAGGATTTGACTCTCT
CAGGTCAATCCACCAAACACTTTATTGCCCCAACCTACCTTTCCTTTAAACATAAGAATCATATTGAATTGGACGATCGA
TTATTACAGATTGTCTATGTTCGCGACTATGGTATGGAGCTAGGGGATAAATTTATTCGAGACTTGATGCAGTCAGATTT
GGAAGTGATGATTAGCCTACATGCTAAAGGCTCTACCAAGTCTGAAACCATGACCAAACTACGAACCAAGAAGACCTTGA
TGGAATCGCAAAAGATTGGGGAACAACAAAAGATGGCTCGGACTGGAATCTATTTGGAGAAGGTCGGGCATGTTCTTGAA
AACAATATCGATGAAGCTGAGGCTCTTCTTCAAACCATGACCCAAACAGGAGATAAACTGTTTGACACCGTATTTCTAAT
TGGCGTGCTGGCGGATACTGAAGACCAACTCAAACAATCTCTTGATATTATCAAGCAAGTGGCAGGGTCTAATGATATGA
TTATTGATAATTTGACCTATATGCAAGAAGCTGCCTTTAATAGTCTCTTGCCATTTGGGAGGAACTATCTTGAAGGTGTT
TCTCGGTCTCTATTGACTTCAAACATTGCCGTGAATGCACCTTGGACTTCCGTTGATATTCAGGACAAGGGTGGAAAATT
TTATGGCATCAATCAAATCTCAAGTAATATCATCAGTATTGACCGTGGCAAGTTAAATACTCCGTCAGGTTTGATTTTAG
GGACTTCTGGAGCGGGCAAAGGGATGGCGACAAAACACGAGATCATCTCTACTAAGCTCAAGGAAGCAGATAGTGATACT
GAAATTATTATTGTTGACCCAGAAAACGAGTACAGTATTATCGGTCAAGCCTTTGGTGGGGAGAGTATTGATATTGCCCC
AGATTCTACCACCTTCTTAAATGTCTTAGATCTATCTGATGAGAATATGGATGAGGATCCGGTTAAGGTCAAATCCGAAT
TTCTCTTGTCTTGGATTGGAAAGCTCTTGGACCGTAAAATGGATGGTCGTGAAAAGTCCTTGATTGACCGTGTGACAAGA
CTCACTTATAAGCATTTTGACACACCGTCCTTGGTCGAATGGGTCTTTGTCTTAGCTCAACAACCTGAACAGGAAGCTAA
GGACTTGGCACTGGATATGGAACTCTATGTGGAAGGGTCGCTGGACATATTTTCACATCGGACCAATATTAAAACAGACA
GTCATTTCCTGATTTACAATGTCAAAAAGTTAGGCGATGAATTAAAACAGATTGCCCTCATGGTTATCTTTGACCAAATT
TGGAATCGGGTGGTCAAAAACCAAAAGCTAGGGAAGAAGACCTGGATTTATTTTGATGAAATGCAGCTACTCTTATTGGA
CAAATATGCCTCTGATTTCTTCTTTAAACTTTGGAGTCGTGTCCGTAAGTATGGGGCGATACCGACAGGCATTACTCAGA
ATGTAGAAACTCTTCTTTTGGATGCCAATGGTAGACGCATTATTGCCAATAGTGAGTTCATGATACTTTTAAAACAGGCT
AAGAGTGATCGTGAAGAGTTGGTGCATATGCTTGGACTTTCTAAAGAGCTGGAGAAGTACTTAGTCAATCCTGAAAAAGG
GGCTGGGCTAATCAAGGCCGGTTCAACCGTTGTTCCTTTCAAAAATAAGATTCCACAACACACCAAGCTCTTTGACATCA
TGAGTACGGACCCTGAAAAAATGAGGACATGA

Protein sequence :
MKKLKHSMKPKTSSNDQKQKKKTQKQEIRPSTVNTLAYQGLFQNGLMQVSPSYFSQTYLLGDVNYQTVGLDDKGAIVEKY
SDLINSLDDKTNFQLTIFNQKVNLEKFRKSILYPLQEDGFDTYRDELNRMMDANLEAGENNFSAVKFLSFGKSDQTPKLA
FRSLSQIGEYFKSGFSEIDVSLGLLGGEERVNVLADILRGENHLPFSYKDLTLSGQSTKHFIAPTYLSFKHKNHIELDDR
LLQIVYVRDYGMELGDKFIRDLMQSDLEVMISLHAKGSTKSETMTKLRTKKTLMESQKIGEQQKMARTGIYLEKVGHVLE
NNIDEAEALLQTMTQTGDKLFDTVFLIGVLADTEDQLKQSLDIIKQVAGSNDMIIDNLTYMQEAAFNSLLPFGRNYLEGV
SRSLLTSNIAVNAPWTSVDIQDKGGKFYGINQISSNIISIDRGKLNTPSGLILGTSGAGKGMATKHEIISTKLKEADSDT
EIIIVDPENEYSIIGQAFGGESIDIAPDSTTFLNVLDLSDENMDEDPVKVKSEFLLSWIGKLLDRKMDGREKSLIDRVTR
LTYKHFDTPSLVEWVFVLAQQPEQEAKDLALDMELYVEGSLDIFSHRTNIKTDSHFLIYNVKKLGDELKQIALMVIFDQI
WNRVVKNQKLGKKTWIYFDEMQLLLLDKYASDFFFKLWSRVRKYGAIPTGITQNVETLLLDANGRRIIANSEFMILLKQA
KSDREELVHMLGLSKELEKYLVNPEKGAGLIKAGSTVVPFKNKIPQHTKLFDIMSTDPEKMRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0969 YP_001198335.1 Type IV secretory pathway, VirB4 component Virulence 89K Protein 0.0 99
SSU98_0982 YP_001200540.1 Type IV secretory pathway, VirB4 component Virulence 89K Protein 0.0 99
Spaf_1125 YP_006309927.1 hypothetical protein Not tested FWisland_1 Protein 0.0 82