|
Name : SSU12_0902 (SSU12_0902) Accession : YP_006078333.1 Strain : Streptococcus suis SS12 Genome accession: NC_017619 Putative virulence/resistance : Virulence Product : conjugal transfer protein TraG Function : - COG functional category : - COG ID : - EC number : - Position : 930860 - 932677 bp Length : 1818 bp Strand : - Note : - DNA sequence : ATGTATTCCAGGCAAAAAGCATTTGTCTTTGGACTCTTGGGTCTCGCCTTTGGCTATTTCTGCCATCGTCTAACCCTACT CTATGATAGTTTAACCAATGCCCCACCTATGGAACGTATTGCCTACCTCTTAGGAGAGGGGCTAAATCAGGTTTTCAATC CTTTATGGCTATTTTCCTTTACTCAAAAATCTTTTCTTGCCTTTATCCTTGGGGTTCTAACGATGACGCTAGTCTATCTT TATGTATCGACAGGACAGAAGGTCTATCGAGAAGGGGAAGAATACGGTTCTGCACGATTTGGAACCAGTAAGGAAAAGCG GAACTTTTACAGTAAGAATCCTTTTAATGACACGATTTTGGCTCGTGATGTTCGTCTAACCTTGTTGGAAAAGAAGAAAC CCCAGTTTGATCGAAATAAAAATTTGATTGTCATTGGGGGTTCTGGGGCAGGTAAGACCTTTCGCTTTGTGAAACCAAAC CTTATCCAACTTAACTGTTCCAATATTGTCGTTGATCCTAAAGACCATTTGGCTGAGAAGACAGGTAAACTCTTTTTAGA AAACGGTTATCAGGTTAAGGTTTTAGACTTGGTTAATATGACCAATTCAGACGGTTTTAATCCCTTTCGTTATGTAGAAA CAGAGAATGATTTGAACCGCATGTTAACGGTCTATTTTAACAATACCCGTGGGTCTGGTTCTCGCAGTGATCCATTTTGG GACGAGGCTTCCATGACATTGGTGAGAGCTATTGCCTCTTATTTGGTGGATTTTTACAATCCTCCAGGAAGTTCCAAGCA AGAGCAGGAAGCAAGACGTAAGCATGGCCGTTATCCAGCCTTTTCTGAGATTGGGAAACTCATCAAACTCTTATCAAAGG GAGACAATCAGGACAAAAGTGTTCTTGAAGTCCTGTTTGAAGATTATGCTAAAAAATATGGTCACGAAAACTTTACCATG CGAAACTGGGCGGATTTCCAAAACTATAAGGATAAGACCTTGGATTCGGTGATTGCGGTCACAACAGCTAAATTTGCCCT TTTTAATATCCAATCGGTGATTGATTTGACGCAAAGAGACACTATGGATTTGAAAACGTGGGGCACTCAAAAGACCATGG TCTATCTTGTTATTCCAGACAATGATACGACCTTTCGTTTCCTATCTGCTTTATTTTTCTCTACGGTTTTCTCCACTTTG ACCAGACAGGCTGATGTTGACTTTAAAGGGCAACTGCCGATTCATGTTAGAAGCTATCTGGATGAGTTTGCGAATGTCGG AGAAATCCCAGACTTTGCTGAACAAACCTCAACAGTTCGCTCTAGGAACATGAGTCTAGTTCCAATCTTGCAAAATATTG CTCAACTCCAAGGACTTTATAAGGAAAAAGAGGCTTGGAAAACTATACTGGGGAATTGTGACAGCCTCCTATATTTGGGT GGAAATGACGAGGAAACTTTCAAATTTATGAGTGGTCTATTAGGCAAACAAACCATTGATGTCAGAAGTACCAGTCGTTC TTTTGGGCAGACTGGCTCAAGTTCTACCTCTCACCAGAAAATTGCCCGTGACTTGATGACGGCTGATGAAGTAGGGAATA TGAAACGAGATGAATGCCTCGTACGCATTGCAGGAGTTCCTGTTTTTCGAACCAAGAAATATTTTCCGCTCAAACATAAG AATTGGAAATGGCTTGCGGATAAGGAAACCGATGAACGCTGGTGGCACTATTATATCAGTCCCCTAACCGCTGAGGAAGA GGTAGATTTGTCAGGCCATAAAATAAGGGATTTAAGCACAGAAACGACACTACATTAA Protein sequence : MYSRQKAFVFGLLGLAFGYFCHRLTLLYDSLTNAPPMERIAYLLGEGLNQVFNPLWLFSFTQKSFLAFILGVLTMTLVYL YVSTGQKVYREGEEYGSARFGTSKEKRNFYSKNPFNDTILARDVRLTLLEKKKPQFDRNKNLIVIGGSGAGKTFRFVKPN LIQLNCSNIVVDPKDHLAEKTGKLFLENGYQVKVLDLVNMTNSDGFNPFRYVETENDLNRMLTVYFNNTRGSGSRSDPFW DEASMTLVRAIASYLVDFYNPPGSSKQEQEARRKHGRYPAFSEIGKLIKLLSKGDNQDKSVLEVLFEDYAKKYGHENFTM RNWADFQNYKDKTLDSVIAVTTAKFALFNIQSVIDLTQRDTMDLKTWGTQKTMVYLVIPDNDTTFRFLSALFFSTVFSTL TRQADVDFKGQLPIHVRSYLDEFANVGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKEKEAWKTILGNCDSLLYLG GNDEETFKFMSGLLGKQTIDVRSTSRSFGQTGSSSTSHQKIARDLMTADEVGNMKRDECLVRIAGVPVFRTKKYFPLKHK NWKWLADKETDERWWHYYISPLTAEEEVDLSGHKIRDLSTETTLH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0973 | YP_001198339.1 | Type IV secretory pathway, VirD4 component | Virulence | 89K | Protein | 0.0 | 99 |
| SSU98_0987 | YP_001200545.1 | Type IV secretory pathway, VirD4 component | Virulence | 89K | Protein | 0.0 | 99 |
| traG | YP_006309931.1 | TraG/TraD family protein | Not tested | FWisland_1 | Protein | 0.0 | 77 |
