Gene Information

Name : SSU12_0892 (SSU12_0892)
Accession : YP_006078323.1
Strain : Streptococcus suis SS12
Genome accession: NC_017619
Putative virulence/resistance : Unknown
Product : SNF2-related protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 911199 - 917147 bp
Length : 5949 bp
Strand : -
Note : -

DNA sequence :
ATGAATCAAGAAGTCTTACTACAAATGATGAGAGCCACCATTCCTCGTGATAGAGCCCTGCTTGAGGCATTTTTATATTA
CCAAGCAGAGCATTTTGATGAGGAGTGGGATAGTCTTATTCTTCAGTTTATGACCAATAGGCAGGAATTCAAAAGACCTG
TTCAGGTACTTCACTTTGAGACAGATGTTTCAGCTTTTGTCCAGGCTAGTCCTTATGATACTGCTCATGATCTATTGACC
TATACACAAGTTTTCGGCCAAAGTGGTCTCCAAAAACTCGACAAACTATCGCCGTCTGAAAAAGACTTGGTGATAGAAGT
GGCCTTGTTTAATCTGGCCACTCGTTTTCAATTATTGGATTCCAATGGAGTCTACCAAGCTATCTCACCTGATTCTCTAT
TACAAAAGAGTAGGGGAGCAAATTTGGTCAATGTTTATCGTGTGGCTAATAATTTAGCGGATCGGATTAGTCGAGATATT
GAACAGTTTCTCTTAACTTACGAGCCTGAGCTTGAAACAAGAGTTGATGAAACAGTTCAAGAAAATGAAGAAACTGGTGA
TGAGCACAAAGTGAGTAATCAAGCAATATCATTTAGAGAAGATGGCTCTCTGGTTATTGCTAGTTTGGATGTAGATTTGT
CTCAACTAGATGTTCAAACAGGAAAAACCAGTCATCTGCCTGCCTATGAAGAGTTATCTTTACGACGTAAATTTGAGATT
CTAACTTATTTTGACCAAATTCGTAATGAACGTTCCAAAGTCGCAAGTTTTAGACGAGGTGATTTTGACACTGAGATGGA
AATGACACCAATCTTTGAGGGCGAGGAGTTACTTACCTATCTAGAGGCTGATGGTAGTCCCTATGAGCTGAAACGAACGC
TGACTACAGTCGAAGAAAAGGAATTAGAAAAAATTGGACAAGCTATTAGGACAGAAAATCAAGAAAAATTGACTCAGCTA
GGGATTGAGCTATCTCAGTTTGACCCAGACCGAGTCGGTATTTTATTGGATGCGGCTGGTCGTTTTCGTTTAAAAAATGC
GGACCTTGCTTTACTAGGTGGCTATCCCAAAGCCTCGGTAACTCAACTAACCCTTGCGACAGAACTACTCCAAATGGGAC
TAAGTCATGAAAAGGTTGAATTTTTCTTTGGTAGCCAGCTTTCCCTTGAAGAGCTGCGACAAATTGCCTACGCCTTTTTA
CACCAAGAACTTAGCAGAGAAGACGCGGAGCATTTTGAAAAGGATAAGATTAATCAGCCAGATTTAACCCTTAGAGATTG
GAAAAGGAAGCTAGAGAAAGCTGAGACGAAAGTAGTGGTTGATGAAGAGTTAGCGGAAAATCCACTAGTCCAGAGAGTAT
TGGACACTTATCCTCTGGGGTCATTGGTTTCCTATAAGGGACAGGACTTTGAGGTCGTGTCAGTCAGTGATGCTCGATTG
AATGGTTTGATTCGGATTGAGTTAGTCAATGATTTTTCGGATATCATTGAACAAAATCCAGTTCTTTATGTGAGGACCTG
GGAAGAAGTCAGTCAGGCACTTCATCAGCTAAAGGCAGAACCACAAACAGAGTTAGAAGAAGCGGACCAAGAACTAAATC
TTTTTTCATTTCTGGAAGAGGAGCCAGTTCAGAGTATTGGACTATTGGAACCAGATGGTTCAGAAAAAGGTCATAACGAT
ACTGATCTTGAAGAAACAGATAGTCAAATTCCTGAAGAGGTAGTAGTCGAAACAATTCCTGAGATTCCAGTAACGGACTT
TTATTTTCCAGAAGATATGACGGACTTTTATCCAAAGACTGCTAGAGATAAGGTTGAGACAAACATTGCGGCCATTCGTT
TGGTAAAAAATCTAGAAGTAGAGCACCGCAATGCTTCATCAAGTGAACAAGAACTCCTTGCCAAGTATGTGGGCTGGGGT
GGACTTGCCAATGATTTCTTTGATGACTATAATCCAAAATTTTCTAAGGAACGAGAAGAACTGAAAAGCCTAGTCACAGA
TAAAGAGTATTCGGATATGAAACAGTCCTCTCTGACAGCCTATTATACAGCCCCTGCCCTGATCCGTCAGATGTGGGATA
AGTTGGAAAGAGATGGCTTTACAGGTGGCAAAATCCTAGATCCTTCCATGGGAACAGGGAATTTCTTTGCGGCTATGCCA
AAACACTTAAGAGAAAAGAGTGAGTTGTATGGCGTAGAGTTAGATACTATTACAGGAGCTATAGCCAAACACCTTCATCC
CAATAGTCACATTGAAATTAAGGGCTTTGAGACGGTAGCTTTTAACGACAATAGTTTTGATTTGGTGATTTCAAATGTGC
CCTTTGCCAATATACGAATTGCGGATAACAGGTACGATAGGCCTTACATGATTCATGATTACTTTGTCAAAAAGTCACTT
GATTTGGTCCATGATGGTGGACAAGTAGCGATTATCTCTTCAACAGGAACCATGGATAAGCGAACAGAAAACATCTTACA
AGATATTCGTGAGACAACTGAATTTCTTGGTGGGGTTCGACTGCCTGATTCTGCCTTTAAGGCCATTGCAGGAACGAGTG
TCACAACGGATATGTTATTCTTCCAGAAACACTTAGACAAGGGATATGTGGCAGACGACTTAGCGTTTTCAGGTTCCATT
CGTTATGAAAAGGATAGTCGCATTTGGCTCAATCCTTATTTTGATGGGGAATACAATAGCCAAGTGCTAGGAACCTACGA
GGTCAGAAATTTTAACGGAGGAACACTTTCTGTTAAGGGGACTAGTGATAACTTGATTGCAAGTGTTGAAACAGCTCTAC
ATCACGTAAAAGCCCCAAGAAAGATTGATAGAAATGAGGTCATCATTAACCCAGATGTGTTGACCAAACAAGTCATTGAC
ACCTCCATTCCAGCTGAAATGAGGGAGAATCTAGGTCAGTACAGTTTTGGTTATCAGGGTTCTACAGTTTACTATCGAGA
TAACAAAGGCATTCGAGTCGGAACCAAGACGGAAGAAATCAGTTACTATGTCGATGAAGAGGGCAACTTCAAAGCATGGG
ACACCAAGCATTCTCAAAAGCAGATTGATCGCTTTAATGTCTTAGAAGTGACTGATAACACTGCTCTGGATGTCTATGTG
ACCGATGATGCAGCAAAACGTGGTCAGTTTAAGGGTTATTATAAAAAGACAGTTTTCTATGAAGCTCCTTTGTCTGATAA
AGAAGTGGCACGAATCAAAGGAATGGTCGATATTCGCAATGCCTACCAAGAGGTCATTGCCATTCAACGCTATTATGACT
ACGATAAGGGTACCTTTAACCACTTGTTAGGCAAACTCAATCGTACCTATGATAGCTTTGTCAAACGCTTTGGGTATTTG
AATAGTGCTGTGAACCGCAATCTTTTTGATAGTGATGATAAGTATTCGCTTCTTGCTAGTTTGGAAGATGAAAGTCTGGA
TCCAAGTGGAAAGTCTGTTATCTATACTAAATCCCTTGCCTTTGAGAAGGCTCTAGTGCGTCCTGAAAAAGAGGTTAAAA
AGGTACATACTGCCCTTGATGCCTTAAATTCGAGCTTGGCTGACGGACGTGGTGTTGATTTTGCTTATATGATGTCTATC
TATCAGGTTGAATCGAAGATGACCTTGATTGAGGAATTAGGAGACGCTATTATTCCAGACCCAGAACGCTATCTAAACGA
TAGGGAAGTAGTCTATGTGTCTCGGCAGGACTTCTTATCAGGAGATGTGGTGACTAAGTTAGAGGTTGTGGACTTACTCA
TTAAAGCAGACAACTCTGATTTTCCTTGGGTCTATTATCAAGATCTCTTAGAAGACGTGAAACCACCACGTGTGACCTTA
GCTGATATTGATTATCGGATTGGCTCACGTTGGATTCCTCTAGCCGTTTATGGGAAATTTGCCCAAGAAACCTTTATGGG
ACAAACTTTTGACCTGACTGACCAAGAAGTATCAACTGTTCTTGAAGTCAGTCCGATTGATGGGACGATGTCTTACCAAT
CCAAGTTTGCCTTTAGATACTCTACCGCAACGGATAGAAGTTTAGGTGTGCCTGGGTCACGCTATGATAGTGGCCGAAAA
ATCTTTGAAAACCTGCTTAATTCCAATCAACCAACCATTACCAAACAAGTGGAAGATGGGGATAAGAAAAAGCATGTGAC
GGACGTGGAGAAGACAACGGTTCTTCGTGCTAAGGAAACACAATTTCAAGAACTCTTCCAAGATTTTGTGACTAGTTACC
CAGAGGTGCAACAGATGATTGAAGAGACCTATAATAGCCTTTATAATCGTACAGTCTCAAAAGTTTATGATGGCAGCCAT
TTAACCATTGATGGGCTTGCCCAGAATATTTCCTTACGCCCTCACCAAAAGAATGCTATTCAACGGATTGTGGAAGAAAA
ACGAGCGCTTTTAGCTCATGAAGTGGGTTCAGGTAAGACCTTAACCATGCTTGGGGCAGGATTCAAACTGAAAGAACTGG
GAATGGTGCATAAGCCTCTTTATGTGGTGCCGTCTAGTTTGACTGCTCAGTTTGGTCAAGAAATCATGAAGTTCTTCCCA
ACGAAGAATGTTTATGTGACGACCAAGAAAGATTTTGCCAAAGCCAAACGCAAGCAGTTTGTCTCACGGATCATCACAGG
GGACTACGATGCCATTGTCATTGGGGATTCCCAGTTTGAAAAAATCCCTATGAGCCATGAAAAGCAAGTGACCTATATTC
AAGATAAGTTACAACAACTCCGTGACATCAAGCAAGGCAGTGATAGTGACTATACAGTTAAAGAAGCAGAGCGTTCCATT
AAGGGCTTAGAACATCAATTGGAAGAGCTCCAAAAGTTGGAACGTGATACCTTTATTGAGTTTGAAAATCTGGGCATTGA
TTTTCTCTTTGTGGACGAAGCTCACCATTTCAAGAATATTCGCCCCATTACTGGATTAGGCAATGTCGCAGGGATTACCA
ACACCACCTCTAAAAAGAACGTGGATATGGAAATGAAAGTGAGACAGGTTCAAGGAGAACACGACTATCGTAATGTGGTC
TTTGCGACAGGAACACCAGTCTCTAACTCTATTAGTGAACTCTATACCATGATGAGCTATATCCAACCCGATGTCCTAGA
ACGATACCAGGTCTCTAATTTTGATTCATGGGTAGGGGCTTTTGGGAATATCGAAAATTCTATGGAACTAGCACCGACAG
GGGATAAATACCAACCCAAGAAACGCTTTAAGAAGTTTGTGAACCTGCCTGAACTCATGCGGATTTATAAGGAAACTGCC
GATATTCAGACCTCAGATATGCTTGATTTACCTGTTCCTGAAGCTAAAGTCATTGCGGTAGAGAGTGAACTCACAGAAGC
TCAGAAATACTACCTTGAAGAGTTGGTTGACCGTTCAGACGCTATCAAGTCAGGCAGCGTTGATCCAAGTAGAGATAACA
TGCTTAAAATCACAGGAGAAGCCAGAAAATTAGCCATTGATATGCGCCTCATTGACCCTGCCTATACTTTATCTGACAAC
CAGAAAATCCTTCAAGTAGTGGATAATGTGGAACGCATTTACCGTGAGGGAGAAAATGAGAAAGCTACTCAGATGATTTT
CTCTGATATTGGAACCCCTAAAAGTAAGGAAGAAGGCTTTGACGTTTACAATGAATTGAAAGACCTCTTAGTGGATAGAG
GGATTCCCAAAGAAGCAATTGCCTTTGTCCATGACGCTAATACGGATGACAAGAAAAACTCTCTGTCACGCAAGGTCAAT
AGTGGAGAAGTACGGATTCTCATGGCTTCTACGGAAAAAGGTGGAACTGGTCTAAACGTGCAATCACGTATGAAAGCTGT
CCACCACTTAGATGTTCCATGGCGTCCTTCTGATGTAGGACGGATTTTGCGGACATTCAAAATAAAAAAGAATGTGGAGG
TAACAGACAATGGCAAAATCATTATTTGA

Protein sequence :
MNQEVLLQMMRATIPRDRALLEAFLYYQAEHFDEEWDSLILQFMTNRQEFKRPVQVLHFETDVSAFVQASPYDTAHDLLT
YTQVFGQSGLQKLDKLSPSEKDLVIEVALFNLATRFQLLDSNGVYQAISPDSLLQKSRGANLVNVYRVANNLADRISRDI
EQFLLTYEPELETRVDETVQENEETGDEHKVSNQAISFREDGSLVIASLDVDLSQLDVQTGKTSHLPAYEELSLRRKFEI
LTYFDQIRNERSKVASFRRGDFDTEMEMTPIFEGEELLTYLEADGSPYELKRTLTTVEEKELEKIGQAIRTENQEKLTQL
GIELSQFDPDRVGILLDAAGRFRLKNADLALLGGYPKASVTQLTLATELLQMGLSHEKVEFFFGSQLSLEELRQIAYAFL
HQELSREDAEHFEKDKINQPDLTLRDWKRKLEKAETKVVVDEELAENPLVQRVLDTYPLGSLVSYKGQDFEVVSVSDARL
NGLIRIELVNDFSDIIEQNPVLYVRTWEEVSQALHQLKAEPQTELEEADQELNLFSFLEEEPVQSIGLLEPDGSEKGHND
TDLEETDSQIPEEVVVETIPEIPVTDFYFPEDMTDFYPKTARDKVETNIAAIRLVKNLEVEHRNASSSEQELLAKYVGWG
GLANDFFDDYNPKFSKEREELKSLVTDKEYSDMKQSSLTAYYTAPALIRQMWDKLERDGFTGGKILDPSMGTGNFFAAMP
KHLREKSELYGVELDTITGAIAKHLHPNSHIEIKGFETVAFNDNSFDLVISNVPFANIRIADNRYDRPYMIHDYFVKKSL
DLVHDGGQVAIISSTGTMDKRTENILQDIRETTEFLGGVRLPDSAFKAIAGTSVTTDMLFFQKHLDKGYVADDLAFSGSI
RYEKDSRIWLNPYFDGEYNSQVLGTYEVRNFNGGTLSVKGTSDNLIASVETALHHVKAPRKIDRNEVIINPDVLTKQVID
TSIPAEMRENLGQYSFGYQGSTVYYRDNKGIRVGTKTEEISYYVDEEGNFKAWDTKHSQKQIDRFNVLEVTDNTALDVYV
TDDAAKRGQFKGYYKKTVFYEAPLSDKEVARIKGMVDIRNAYQEVIAIQRYYDYDKGTFNHLLGKLNRTYDSFVKRFGYL
NSAVNRNLFDSDDKYSLLASLEDESLDPSGKSVIYTKSLAFEKALVRPEKEVKKVHTALDALNSSLADGRGVDFAYMMSI
YQVESKMTLIEELGDAIIPDPERYLNDREVVYVSRQDFLSGDVVTKLEVVDLLIKADNSDFPWVYYQDLLEDVKPPRVTL
ADIDYRIGSRWIPLAVYGKFAQETFMGQTFDLTDQEVSTVLEVSPIDGTMSYQSKFAFRYSTATDRSLGVPGSRYDSGRK
IFENLLNSNQPTITKQVEDGDKKKHVTDVEKTTVLRAKETQFQELFQDFVTSYPEVQQMIEETYNSLYNRTVSKVYDGSH
LTIDGLAQNISLRPHQKNAIQRIVEEKRALLAHEVGSGKTLTMLGAGFKLKELGMVHKPLYVVPSSLTAQFGQEIMKFFP
TKNVYVTTKKDFAKAKRKQFVSRIITGDYDAIVIGDSQFEKIPMSHEKQVTYIQDKLQQLRDIKQGSDSDYTVKEAERSI
KGLEHQLEELQKLERDTFIEFENLGIDFLFVDEAHHFKNIRPITGLGNVAGITNTTSKKNVDMEMKVRQVQGEHDYRNVV
FATGTPVSNSISELYTMMSYIQPDVLERYQVSNFDSWVGAFGNIENSMELAPTGDKYQPKKRFKKFVNLPELMRIYKETA
DIQTSDMLDLPVPEAKVIAVESELTEAQKYYLEELVDRSDAIKSGSVDPSRDNMLKITGEARKLAIDMRLIDPAYTLSDN
QKILQVVDNVERIYREGENEKATQMIFSDIGTPKSKEEGFDVYNELKDLLVDRGIPKEAIAFVHDANTDDKKNSLSRKVN
SGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDVGRILRTFKIKKNVEVTDNGKIII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU98_0975 YP_001200533.1 SNF2 family protein Not tested 89K Protein 0.0 93
SSU05_0962 YP_001198328.1 SNF2 family protein Not tested 89K Protein 0.0 93
Spaf_1117 YP_006309919.1 SNF2 family protein Not tested FWisland_1 Protein 0.0 66