Gene Information

Name : SSU12_0865 (SSU12_0865)
Accession : YP_006078296.1
Strain : Streptococcus suis SS12
Genome accession: NC_017619
Putative virulence/resistance : Virulence
Product : sigma-54 interacting domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 892328 - 893095 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence :
ATGAGGTTGGAAGAATTTAGTGAAGCTGAGTTTCAGAAGGCTTTACAGCGAACCATTCGGGCTTTAACCCGAGGAAAGAC
GATCCCAGATCGACCAAAAGCTATCTTGCTTGGAGGACAAAGCGGGGCAGGTAAGACGACTATTCATCGTATCAAGCAAA
AAGAATTTCAAGGTAATATTATTATCATCGATGGTGATAGCTACCGTTCTCAGCATCCCAACTACTTAGCCCTGCAAGAA
AAGTATGGCAAGGACAGCGTGGACTATACCAAGAGATTTGCAGGAAAAATGGTAGAGCATCTGGTTGACGGACTCAGCAC
GCAGGGGTATCACTTGCTGATTGAGGGAACTTTGCGAACCACTCAAGTTCCTCGTCAGACTGCTCAATTATTAGTATCAA
AAGGCTACCAGGTTTCCTTAGCTGTGATTGGCACCAAACCAGAATTGTCCTATCTCAGTACTTTGATTCGTTACGAAGAG
CTTTATGCCATCGATCCCAATCAGGCCAGAGCAACGCCAAAAGAACACCATGATGGGATTGTAGAGAACTTGGTTGATAA
CCTAAGGGAGTTAGAAAGAGAGCAACTCTTTGACCAGATTCAGATTTATCAAAGAGACAGGACTTGCATTTATGATTCTG
CAATTGATGAAGGCTCCGCAGCAGAAGTGTTACAAGAGTGTCTCTTTGGAAAATGGAGCAAGGTAGAGGAGGAGATGGTG
AAGGAGAGTGAACTCCTACTTAATGAATTACTTGAGAAAAATAAATAA

Protein sequence :
MRLEEFSEAEFQKALQRTIRALTRGKTIPDRPKAILLGGQSGAGKTTIHRIKQKEFQGNIIIIDGDSYRSQHPNYLALQE
KYGKDSVDYTKRFAGKMVEHLVDGLSTQGYHLLIEGTLRTTQVPRQTAQLLVSKGYQVSLAVIGTKPELSYLSTLIRYEE
LYAIDPNQARATPKEHHDGIVENLVDNLRELEREQLFDQIQIYQRDRTCIYDSAIDEGSAAEVLQECLFGKWSKVEEEMV
KESELLLNELLEKNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0936 YP_001198302.1 Signal recognition particle GTPase Not tested 89K Protein 3e-103 96
SSU98_0943 YP_001200501.1 Signal recognition particle GTPase Not tested 89K Protein 3e-103 96
SP_1051 NP_345525.1 hypothetical protein Not tested PPI-1 Protein 2e-80 71
SPN23F_09710 YP_002510952.1 zeta-toxin Virulence PPI-1 Protein 1e-80 71
Spaf_1102 YP_006309904.1 hypothetical protein Not tested FWisland_1 Protein 1e-80 71