Gene Information

Name : SSU12_0845 (SSU12_0845)
Accession : YP_006078278.1
Strain : Streptococcus suis SS12
Genome accession: NC_017619
Putative virulence/resistance : Unknown
Product : phage integrase family site specific recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 873636 - 874838 bp
Length : 1203 bp
Strand : -
Note : -

DNA sequence :
ATGGCAACAAAAAATAGTAAAAAATACAAAGGTGTTTATTGCGATAATAAGGGAAAGATATTTTATCAGATTGATCTTGG
AATCGACCCAGTAACTGGCAAAAGGGTACAAAAGAAAGCTAGAAAAAATCAATATGGTAAAACTTTTGAAACGATGAAAG
AAGCATATGACGAATTAGTTCGTATAAAATATGAATTTTCCAACAAAGTCAGTTTAGAAAATTACAATTTGACTTTTGAA
AACTATATGAACACAATTTATTTAAGAGCATATAAGCAAAAAGTTCAGTCTGTAACATATAAGACGGCTCTTCCTCATCA
TAAACTTTTTATTCAATATTTTGGTTCAAAGCCATTAAAAGCAATAACTCCTAGAGATTGTGAGGCTTTTAGATTGCATA
TCATAGAAAATTATTCTGAAAACTATGCGAAAAATTTATGGTCAAGGTTTAAAGCTTGTATGGGTTATGCAGAAAGACTT
GGCTATATTTCAGATATGCCTTGTAAAGCATTAGATAATCCAAGAGGTAAGCATCCAGAAACTCCATTTTGGACCTATGC
GGAGTTTCAGACATTTATTAAATCATTTGACTTACATGATTATGAAGAATTACAACGATTTACTGCCATCTGGTTATATT
ATATGACAGGTGTACGAGTGAGTGAAGGTTTATCTTTATGTTGGGAGGATATTGATTTTGATAAAAAATTTCTAAAGGTA
CATACAACCTTGGAGAAAGATGAAAATGGAAATTGGTATCGTAAAGACCAAACAAAGACTCCAGCAGGTGAACGACTTAT
TGAATTGGATGATATAACTATTGAAGTACTTCAAGTTTGGCGAAAAAATCAGTTTGCCAATCAAGATACAGATTTTATCA
TTTCAAGATTTGGAGATCCTTTCTGTAAATCAACCATTTGTCGAATCATCAAACGTAAAGCACAACAAGTAGGAGTTCCT
GTTATTACAGGTAAAGGTCTTAGACATAGTCATGCTTCTTATCTAATAAATGTTTTGAAAAAAGATATTTTATATGTGGC
AAGACGAATGGGACATGCTGATAAATCAACAACTTTGAACACATATAGTCATTGGTTTAATGCTTTAGATAAAACAGTTT
CTGAAGAAATCACACAAAATATTAAAAGTGCAGGATTGGATTCAATTTTATGCCAAAAATCCTGCCAAACTTCAAATTTA
TAA

Protein sequence :
MATKNSKKYKGVYCDNKGKIFYQIDLGIDPVTGKRVQKKARKNQYGKTFETMKEAYDELVRIKYEFSNKVSLENYNLTFE
NYMNTIYLRAYKQKVQSVTYKTALPHHKLFIQYFGSKPLKAITPRDCEAFRLHIIENYSENYAKNLWSRFKACMGYAERL
GYISDMPCKALDNPRGKHPETPFWTYAEFQTFIKSFDLHDYEELQRFTAIWLYYMTGVRVSEGLSLCWEDIDFDKKFLKV
HTTLEKDENGNWYRKDQTKTPAGERLIELDDITIEVLQVWRKNQFANQDTDFIISRFGDPFCKSTICRIIKRKAQQVGVP
VITGKGLRHSHASYLINVLKKDILYVARRMGHADKSTTLNTYSHWFNALDKTVSEEITQNIKSAGLDSILCQKSCQTSNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0903 YP_001198269.1 phage integrase family site specific recombinase Not tested 89K Protein 0.0 99
SSU98_0908 YP_001200466.1 phage integrase family site specific recombinase Not tested 89K Protein 0.0 99
Spaf_1090 YP_006309892.1 integrase Not tested FWisland_1 Protein 3e-124 63