|
Name : SSU12_1990 (SSU12_1990) Accession : YP_006079413.1 Strain : Streptococcus suis SS12 Genome accession: NC_017619 Putative virulence/resistance : Unknown Product : putative transcriptional antiterminator Function : - COG functional category : - COG ID : - EC number : - Position : 1969330 - 1971018 bp Length : 1689 bp Strand : - Note : - DNA sequence : TTGTTATTAGATAAGAGTAGTTGCGCTCTACTGAGGTACCTGATTGGTCTACAGGAACCTGAGACAATCATGGCTATTTC CAAGGGCTTGCAACAATCACGTCGAAAAATCTATTACCATCTAGAAAAAATCAATGATGCCCTACCAACAACTGTAGAGA GTATTGAAAGCTTACCTCGCCTCGGTATTCGACTTACCGAAGCGCAAAAACTAGCCTGTCGAGATCTTCTCGATTCCATT GATTCGTACACCTACGTCATGAGCATGCCTGAGCGCATTCAGCTGATGTTGGTATATATCTGTATCACACCAGAAAGAGT GACCATTGAACGGCTAATGGAGTTGACAGAAGTCTCTCGTAATACGGTCTTAAATGATTTGAATGAAATTCGAACCCAGT TGGCTCAAGAACAATACAAGATGACCCTCTATGTGTCTAAGAGTCATGGCTATAGTCTCGTTTGTCACCCTTTAAATAAA ATCCAATATGTCCACTCACTTCTCTATACCATCTTCTTGGATGCCAATAAAGGTTTTTTGCAGGTTCTAGAAGCTAAGTT ATTTGAGTTGGTGGGGTGTCAGTTGCTCTTCTCAGAAGAAATGGCACAATTTTTACAGGGACAAGTATCGCAGTTAGAAA AGAAACTGGGCAAGAAAATCAATCGCTACGAAATCGAGTTTATGCTCAAAGTATTGCCTTTCTTGCTCCTTAGCTATCGC AATATGGAGCTGGATGACTTGGAAGAACGAGCCATTCTCAAAGAATTTGAACAAGTTCGAGAGCGTATCGAGTACCGAGT TGCTCAGGAATTGAAAGATGCCTTGTTGCAAACCTTTGATTTGAAATTGGATGAAATAGAAATCTCCCTGATTGCCATTT TACTTCTATCCTATCGAAAGGACAGCGATGTTCATGTATTCAGCCAAGATTTCATTGACTTGAAGCGAGTGGTAGAGCGA TTTATTCATCATTTTGAGATACATTCACCATTTGAATTGGAAAATCCTGACGAATTAGCCAAACATCTCTTGGCACATTG TAAGGCTCTGTTGTTCAGAAAAACCTACGGCATCCTATCTAAAAATCCAATGGTCCAACAAATCCAAGATAAATACAGCA CCCTGTTTGCTATGACACGGGTTTCTGGAAAGATTTTGGAGGAGGAGTGGCAGATTGAGTTATCCGATGGAGATATTGCC TATTTGACGATTCATCTAGGAGGAGCTATTCGACGCAGTGGGACACGCAAGGCACAGACACAGATTGTCTATTTAATCTG TGATGAAGGGGTGTCAGTCCAACGCTTACTTTATAAACAATGCCAGCATCACTTGCCAGATAAGAAGATTGGCGCAGTCT TTACCACTGAACAATTCAAGAGTGTCGAAGACTTACTAGAGGTTGATTTCTTGATTACAACCAGCGATGGGTTGGAAACT GATTTCCCTTTGGTGCAGGTTCACCCCATTTTAGATTTTGATGATGTGCTAAACATGACTCATTTTGCAAAATATCGTAG TTTGGCAGATGAAAAACAAGTTTTTGCAGTAGAACTAGACAAGCTTCTATCGGGATATATCGCAGACGGAAGGACCGCTC GAGAACTCAAACAACGGCTACAAAAACTGATTACCAATGAATTATTAACCAATTTATCCAGTCAAGATATTGAAACAGAT CTGTATTAG Protein sequence : MLLDKSSCALLRYLIGLQEPETIMAISKGLQQSRRKIYYHLEKINDALPTTVESIESLPRLGIRLTEAQKLACRDLLDSI DSYTYVMSMPERIQLMLVYICITPERVTIERLMELTEVSRNTVLNDLNEIRTQLAQEQYKMTLYVSKSHGYSLVCHPLNK IQYVHSLLYTIFLDANKGFLQVLEAKLFELVGCQLLFSEEMAQFLQGQVSQLEKKLGKKINRYEIEFMLKVLPFLLLSYR NMELDDLEERAILKEFEQVRERIEYRVAQELKDALLQTFDLKLDEIEISLIAILLLSYRKDSDVHVFSQDFIDLKRVVER FIHHFEIHSPFELENPDELAKHLLAHCKALLFRKTYGILSKNPMVQQIQDKYSTLFAMTRVSGKILEEEWQIELSDGDIA YLTIHLGGAIRRSGTRKAQTQIVYLICDEGVSVQRLLYKQCQHHLPDKKIGAVFTTEQFKSVEDLLEVDFLITTSDGLET DFPLVQVHPILDFDDVLNMTHFAKYRSLADEKQVFAVELDKLLSGYIADGRTARELKQRLQKLITNELLTNLSSQDIETD LY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| M5005_Spy_0155 | YP_281519.1 | BigG family transcription antiterminator | Not tested | Not named | Protein | 1e-116 | 46 |
