Gene Information

Name : SSU12_1005 (SSU12_1005)
Accession : YP_006078436.1
Strain : Streptococcus suis SS12
Genome accession: NC_017619
Putative virulence/resistance : Unknown
Product : IS200 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1031662 - 1032051 bp
Length : 390 bp
Strand : -
Note : -

DNA sequence :
ATGGCGCAAAAGGCACATAGTTTATCACATACAAAGTGGCTGTGTAAATACCACATTGTCTTCACACCTAAGTATAGACG
AAAAATCATCTATAATCAATATCGAAGTAGTTTGGGAGAAATATTCCGACGTTTGTGTACTTATAAAGGCGTAGAAATTA
TCGAAGGACATCTGATGCCGGATCATGTTCATATGTTAGTCAGTATTCCTCCGCGATTAAGTGTATCAAGCTTTATAGGA
TATTTAAAAGGTAAGAGTGCTCTAATGATGTTTGATAAACACGCCAATCTCAAATACAAATTTGGTAATCGTCATTTCTG
GGCAGAGGGATATTATGTAAGTACGGTTGGACTAAATGAAGCCACAATTAAGAAATATATACAAGAATAA

Protein sequence :
MAQKAHSLSHTKWLCKYHIVFTPKYRRKIIYNQYRSSLGEIFRRLCTYKGVEIIEGHLMPDHVHMLVSIPPRLSVSSFIG
YLKGKSALMMFDKHANLKYKFGNRHFWAEGYYVSTVGLNEATIKKYIQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 4e-36 67
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 3e-36 67
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 1e-40 66
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 2e-35 60
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 1e-34 56