|
Name : SSUJS14_0622 (SSUJS14_0622) Accession : YP_006075984.1 Strain : Streptococcus suis JS14 Genome accession: NC_017618 Putative virulence/resistance : Virulence Product : NsuF Function : - COG functional category : - COG ID : - EC number : - Position : 643899 - 644600 bp Length : 702 bp Strand : + Note : - DNA sequence : ATGGAAGTTATCATTCAAAATCTAAGAAAAAGCTATAAAGACAAAGAGGTTTTAAAAGACGTTTCATTTAAAATTGAAGA AGGTACTATTTGTGGTCTTCTGGGAGTAAATGGGGCTGGGAAATCCACCATTATGAAAATTCTTTTTGGGTTAGAAAGAG CTGATAGTGGAGAAGTCATTTTCAATGGAAAGCATAAGGATATTGTAGAAGAAAATAGATTTGATATTGGAGCGTTGATA GAATCTCCTGCTATCTATTTGAATCTTTCTGCATTTGACAATTTAAAAACACGAGCATTGCTACATGATATTCCAGATGA AAGAATTTATGAGGTACTTCAGTTGGTTGGTTTATCTGATACTGGAAAAAAGAAGGCAGGGCACTTTTCATTAGGAATGA AGCAACGACTTGGTTTAGGAATGGCAATTATTACCAATCCTGATTTATTAATTTTAGATGAGCCAACTAATGGTCTAGAT CCAGATGGGATAAAAGAATTGCTAAATTTAATTAGGGATCTAAAAAAATCTGGAATGACAGTCCTCTTGTCCAGCCATCA ACTAAGTGAAGTCAGCAAAATTGCGGATCAAATCGTTATACTGAATCAGGGCAAGATTTTTTACGATGATATTAATAAGA ATTCAAATGATTTAGAAAAACTATTCTTTAGAATTGTCCATGGAGGTGATGGAAATGACTAA Protein sequence : MEVIIQNLRKSYKDKEVLKDVSFKIEEGTICGLLGVNGAGKSTIMKILFGLERADSGEVIFNGKHKDIVEENRFDIGALI ESPAIYLNLSAFDNLKTRALLHDIPDERIYEVLQLVGLSDTGKKKAGHFSLGMKQRLGLGMAIITNPDLLILDEPTNGLD PDGIKELLNLIRDLKKSGMTVLLSSHQLSEVSKIADQIVILNQGKIFYDDINKNSNDLEKLFFRIVHGGDGND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0090 | NP_938487.1 | ABC transporter ATP-binding protein | Not tested | Not named | Protein | 4e-40 | 46 |
| CD241_0087 | YP_005124356.1 | ABC transporter ATP-binding protein | Not tested | Not named | Protein | 7e-40 | 46 |
| cdd4 | CAA63569.1 | - | Not tested | PaLoc | Protein | 1e-39 | 46 |
| epiF | YP_186701.1 | epidermin immunity protein F | Virulence | vSa¥â | Protein | 4e-36 | 44 |
| bsaF | NP_646577.1 | hypothetical protein | Not tested | vSa¥â | Protein | 4e-36 | 44 |
| epiF | YP_494453.1 | lantibiotic epidermin immunity protein F | Not tested | vSa¥â | Protein | 4e-36 | 44 |
| bsaF | YP_001332745.1 | lantibiotic immunity protein F | Not tested | vSa¥â | Protein | 5e-36 | 44 |
| SSU05_0946 | YP_001198312.1 | hypothetical protein | Not tested | 89K | Protein | 3e-37 | 44 |
| SSU98_0954 | YP_001200512.1 | hypothetical protein | Not tested | 89K | Protein | 3e-37 | 44 |
| Spaf_1123 | YP_006309925.1 | putative transport ATP-binding protein | Not tested | FWisland_1 | Protein | 6e-35 | 42 |
| sboF | YP_006309913.1 | SboF | Not tested | FWisland_1 | Protein | 1e-33 | 42 |
| Spaf_1095 | YP_006309897.1 | ABC multidrug transporter | Not tested | FWisland_1 | Protein | 1e-36 | 41 |
| SSU05_0910 | YP_001198276.1 | transport ATP-binding protein | Not tested | 89K | Protein | 2e-34 | 41 |
| SSU98_0915 | YP_001200473.1 | transport ATP-binding protein | Not tested | 89K | Protein | 2e-34 | 41 |
| glrA | YP_004287007.1 | spermidine/putrescine import ATP-binding protein potA | Not tested | Not named | Protein | 2e-23 | 41 |
