|
Name : lysS (SSUJS14_0482) Accession : YP_006075854.1 Strain : Streptococcus suis JS14 Genome accession: NC_017618 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 503288 - 504778 bp Length : 1491 bp Strand : - Note : - DNA sequence : ATGTCAACTGAACATTTTGAAGAATTAAATGACCAACAGATTGTCCGTCGTGAGAAAATGACGGCTCTTGCTGAACAAGG CATTGACCCATTTGGAAAACGTTTTGAGCGTTCTGCCAACTCAGCTGAATTGAAGGCCCAGTACGAAGACAAATCAAAAG AAGACTTGGAAGAATTAGGGCAAACAGCAATCATTGCAGGTCGTATTATGACCAAGCGTGGTAAGGGTAAGGCAGGTTTT GCTCACATTCAAGACCGCGAAGGCCAGATTCAGATCTACGTTCGTAAGGATGATGTTAGCGAAGAAAACTATGAAATCTT CAAAAAAGCAGACCTAGGTGACTTTATCGGTGTCGAGGGAGATGTCTTCAAGACAAACGTTGGTGAGTTGTCTATCCATG CTCGCAAGTTGACTCACTTGTCTAAAGCGCTCCGCCCATTGCCAGAAAAATTCCACGGTTTGACAGACATCGAGACCCGC TACCGCAAACGTTATTTGGACTTGATTACTAACCGCGAGAGCTTTGATCGCTTTGTGACCCGCTCAAAAATTATCTCAGA AATCCGCCGTTACCTTGACGGACTTGGTTTCTTGGAAGTGGAAACACCAGTTCTTCACAACGAAGCTGGTGGTGCTGCAG CTCGTCCATTCATCACCCACCACAATGCCCAAAACATTGACATGGTCCTTCGTATCGCGACAGAACTCCACCTCAAACGC CTGATTGTCGGCGGTATGGAACGCGTTTATGAAATCGGCCGCATCTTCCGTAACGAAGGTATGGATGCGACCCACAACCC TGAGTTCACTTCCATTGAGGTTTACCAAGCTTATGCAGACTACCAAGACATCATGGACTTGACCGAAGGTATTATCCAGC ACACTGCCAAGGCTGTTGTCGGTGATGGTCCGGTGACTTATCAGGGCACTGAAATTGCTATCCACGAGCCATTCAAGCGT ATCCACATGGTTGACGCTATTAAGGAACAAACTGGCGTGGACTTCTGGCAAGAGATGAGCTTCGAGGAAGCAAAAGCCCT TGCAGCTGAGCACAAGGTCCCTGTGGAAAAACACCATACAGAAGTTGGTCAAATCATCAACAGCTTCTTTGAAGAATACG TTGAAGCAACTCTTATCCAACCAACCTTTGTCTATGGTCACCCAGTAGCCGTATCTCCACTGGCTAAGAAAAACGATGAA GACCCACGCTTCACAGATCGCTTCGAGCTCTTCATCATGACCAAGGAATACGGAAATGCCTTTACAGAATTGAACGACCC AATCGACCAATTGGAACGCTTTGAAGCCCAAGCCAAGGCTAAAGAACTCGGTGACGACGAAGCGACAGGCGTTGACTACG ACTACATCGAAGCCCTCGAATACGGTATGCCACCAACAGGTGGACTTGGAATCGGTATCGACCGCCTCTGCATGCTCTTG ACAGATACAACTACTATTCGGGATGTGTTGCTATTCCCTACTATGAAGTAA Protein sequence : MSTEHFEELNDQQIVRREKMTALAEQGIDPFGKRFERSANSAELKAQYEDKSKEDLEELGQTAIIAGRIMTKRGKGKAGF AHIQDREGQIQIYVRKDDVSEENYEIFKKADLGDFIGVEGDVFKTNVGELSIHARKLTHLSKALRPLPEKFHGLTDIETR YRKRYLDLITNRESFDRFVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKR LIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQAYADYQDIMDLTEGIIQHTAKAVVGDGPVTYQGTEIAIHEPFKR IHMVDAIKEQTGVDFWQEMSFEEAKALAAEHKVPVEKHHTEVGQIINSFFEEYVEATLIQPTFVYGHPVAVSPLAKKNDE DPRFTDRFELFIMTKEYGNAFTELNDPIDQLERFEAQAKAKELGDDEATGVDYDYIEALEYGMPPTGGLGIGIDRLCMLL TDTTTIRDVLLFPTMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-111 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006075854.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-111 | 48 |
