Gene Information

Name : SSUJS14_2040 (SSUJS14_2040)
Accession : YP_006077357.1
Strain : Streptococcus suis JS14
Genome accession: NC_017618
Putative virulence/resistance : Virulence
Product : ATP-binding ABC transport protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2029954 - 2030724 bp
Length : 771 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAGCAATCATTGAATTAAAAGATGTCAATTTAGCATATACAGCCAGCCAGACCATGGCTTTAGAAGATGTCAATTT
GGTGATTCCCAGAGGGAGTCGGACGGCTATTGTTGGACCAAATGGTGCTGGGAAGTCCAGTCTATTCAAGGTCATTTTGG
GGTTGGAAAAACCTGACACAGGGCAGGTTCGCTTGCTTGGTCAGGAGGCAGGTCTAGAGAGGTTGATTGCTCAAAAAGTA
GCCTATATTCCCCAATCCAGTCAAGTAAATTGGCAATTTCCTGCAACAGTCTTTGAAATTGTTCTGATGGGACGCTTCGC
TCATAGTAAGGGAATGTTTAGAAGACCGACTAAGGCTGATAGACAGATTGTTGAGCAGGCTCTAGAACGGTTAAAAATTG
CGGATTTACGCCATCGTCAGATTGATCAGCTTTCAGGTGGGCAGCGTCAGCGGGTATTTTTAGCGAGAGCCCTGGCACAG
GAAGCAGAATTGTATCTTATGGATGAGCCTCTAGCAGGGATTGATCAGGCAACAGAAATCATGATCATGGATATGCTCAA
GGAGTTCCAATGTGAAGGGAAAACTTCCATTGTCATTCATCATGACTTAACGACGCTGGATGCCTACTTTGATCACCTTG
TCTGGCTTCATAAGCATGTGATTGACTCTGGTCCGATGGATGAGACTTTGACAAGCGAGAATTATCAGGCGACCTACGGC
ATAGGAAATGGGTTGTTTCTAGGAAATGCCAAAGGAGGCAGTCATGTTTGA

Protein sequence : 
MSAIIELKDVNLAYTASQTMALEDVNLVIPRGSRTAIVGPNGAGKSSLFKVILGLEKPDTGQVRLLGQEAGLERLIAQKV
AYIPQSSQVNWQFPATVFEIVLMGRFAHSKGMFRRPTKADRQIVEQALERLKIADLRHRQIDQLSGGQRQRVFLARALAQ
EAELYLMDEPLAGIDQATEIMIMDMLKEFQCEGKTSIVIHHDLTTLDAYFDHLVWLHKHVIDSGPMDETLTSENYQATYG
IGNGLFLGNAKGGSHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-42 41
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-42 41
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-42 41
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-42 41
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 9e-43 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSUJS14_2040 YP_006077357.1 ATP-binding ABC transport protein BAC0400 Protein 2e-47 46
SSUJS14_2040 YP_006077357.1 ATP-binding ABC transport protein BAC0350 Protein 5e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSUJS14_2040 YP_006077357.1 ATP-binding ABC transport protein VFG0526 Protein 5e-43 41