Gene Information

Name : SPYALAB49_001126 (SPYALAB49_001126)
Accession : YP_006072277.1
Strain : Streptococcus pyogenes Alab49
Genome accession: NC_017596
Putative virulence/resistance : Unknown
Product : integrase core domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1089388 - 1090218 bp
Length : 831 bp
Strand : +
Note : -

DNA sequence :
TTGAATAGTCATCACGCCTGTCAAACTCTTCAAGTCTCTCGTTCAGGTTTCTATGCTTATTTAAAACGTCGTCCCTCTTC
AAGGCATGTTGAGAATGAAGCTTTAAAGGAAATGATTAAAGCCATTTTCTATGAACATAAAGAGCGTTACGGAAGTGTAC
GAATTACCCAAGAACTTTGTAGACGTGGCATCCATGTCAATTATAAACGTGTTGGTAGACTCCTTCATCAGCTAGGTCTC
TATGCTAAAGGAAGTCGATATCAATATAAATACTATAACCGTCGACGTTCTTCATTAACTCGTCCCAATCTTGTTAATCA
ATGTTTCCAAGCGACTGGTAAGAATAAATTATGGCTAGGAGACCTAACCTACATTCCTACACATGAAGGAATACTTTATG
TGTCTGTCTTGATAGACGTTTATAGTAGAAAGATTGTTGGTTGGGCAATAGGCCGACGTATGCAAGACAAGTTGGTAACA
GAAGCTTTCAATCAAGCTTATAATAGAGAAAAGCCTAAAGAAGGGGGAATCGTCCATACAGATCAGGGTTCTCAATATAC
CGGAGCACAATTTCAGGACCTACTTAGACGGAAAAAATGTAAGTCCAGTATGAGTCGAAAAGGTAATCCATACGATAATG
CACTCATGGAATCCTTTTATAAAACATTAAAAAGAGAGCTTGTCAATGATGCTCATTTCGCAACTATTAAGCAAGCTCAG
CTTGAGATTTTTAAATATAGTGAGACTTACTATAACCCTAAACGTCTGCATTCAGCTTTAGGGTATCTCTCACCTGTAGA
ATTTGAAAAAAATAGTTACTCATTAGCTTAA

Protein sequence :
MNSHHACQTLQVSRSGFYAYLKRRPSSRHVENEALKEMIKAIFYEHKERYGSVRITQELCRRGIHVNYKRVGRLLHQLGL
YAKGSRYQYKYYNRRRSSLTRPNLVNQCFQATGKNKLWLGDLTYIPTHEGILYVSVLIDVYSRKIVGWAIGRRMQDKLVT
EAFNQAYNREKPKEGGIVHTDQGSQYTGAQFQDLLRRKKCKSSMSRKGNPYDNALMESFYKTLKRELVNDAHFATIKQAQ
LEIFKYSETYYNPKRLHSALGYLSPVEFEKNSYSLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-33 42
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-33 42
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-33 42
unnamed AAF09022.1 unknown Not tested SHI-O Protein 6e-34 42
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-33 42
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 2e-33 42
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 2e-33 42
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-33 42
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 6e-33 41
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-33 41
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPYALAB49_001126 YP_006072277.1 integrase core domain protein VFG1706 Protein 1e-33 42