Gene Information

Name : clpC (Ssal_02094)
Accession : YP_006069170.1
Strain : Streptococcus salivarius 57.I
Genome accession: NC_017594
Putative virulence/resistance : Virulence
Product : chaperone protein ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2055666 - 2058095 bp
Length : 2430 bp
Strand : -
Note : -

DNA sequence :
ATGCAGGCCATTTTCCATCGTGCTCAGCTTGAGGCAGAGCGTTTTGGAAGTCCTTTCTTGGAGACTTGGCATGTGCTTCT
CGCTATGGTTGAGGTTCCAGGATCTGTAGCCTACCTAACATTTACTGATTTTGAGGACCGTATTCGTGCGGAAGAGATTG
AGACCGCTGCTGTACTAGCGATGGAGAAAAGTCCAAAAGACTTGTCTGAATCAGATATTATCGATTTACGTGCACAGTCA
CATGCTTTAGAGGTTATGTTGCAAGAGGCAGAGGGAATTGCTAGTGTGACTGGTGCTGTAGAGGTAGGGTCTGAACATGT
ATTGATGGCCTTCCTTCTTCATAAGGATTTGATGGTTTGTCGTCTCCTTGAAGTTGCTGGTTTTCAATATAAGGATGACA
GCGATAAGCCTCGTATTATCGATTTACGACGTTCTTTGGAGCGTTACGCAGGTCTTAGTAAGCAAGATTTGAAGGCCATT
CATGACCTTCGTAAGCCTAAAAAATCAAAGGCATCAGGAAATTTTGCTAATATGATGCAGCCTCCTCAATCTTCTACTGG
GGAACTGTCAGATTATACCAAAGACTTAACGGCAGTAGCCGAATTAGATGCTCTTGATCCTGTTATTGGACGTGAGAAAG
AAATTTCACGCATGATTCAGGTTTTGAGTCGTAAAACGAAGAATAACCCAGTTCTTGTGGGTGAAGCAGGTGTTGGTAAG
ACGGCACTTGCGCTTGGCTTAGCACAGCGTATTGCTTCAGGCGAAGTACCTTTTGAGTTGGCTGATATGCGTATCTTAGA
GCTTGATATGATGAGTGTGGTTGCAGGAACACGTTTCCGTGGCGATTTCGAAGAACGTATGAATCAGATCATTGATGAGA
TTGAAGCTGATGGAAAAATCATTCTTTTTATTGACGAATTGCATACGATTATTGGTTCTGGTTCAGGTATTGATAGCACC
TTAGATGCGGCGAATATTTTGAAACCCGCTCTAGCACGTGGAACTCTTCATATGGTTGGAGCAACTACTCAAGCTGAGTA
CCAGAAGCATATTGAGAAAGATGCAGCTCTTTCTCGCCGTTTTGCTAAGATTACAATTGAGGAGCCAAGTGTAGCTGAGG
CGATTGATATTCTAAAAGGCCTACGTTCGTCTTATGAAGACTATCATCGTGTAACGATTACTGATGAGGCGGTTGAGACA
GCAGTCAAGGCAGCCCACCGTTATTTGACGAGTAAAAACTTGCCTGACTCTGCCATTGATCTTTTAGATGAAGCGAGTGC
AACTGTTCAAGGTCGTATCAAAAAAGAAGCCAAACGTGAGATAACGCCTTTGGATGAAGCGCTTCTATCTGGTGATATGA
AGGCTGCTGTTAAACAATATAAAGCTAGCCAAAAAGCAAAATTACCAGAACCTGCCTTGGTAGATGCAGATCAGATTATG
CAAACCCTTAGTCGTCTATCAGGTATTCCTGTTGAGAAGATGACTCAGGCAGATAGCAAGCGTTACTTGAATCTGGAAGC
AGAGCTTCATAAACGTGTTATTGGTCAAGACGAAGCAGTTTCAGCGATTAGTCGTGCTATTCGTCGTAACCAGTCAGGTA
TTCGTACTGGAAAACGTCCGATTGGTTCCTTCATGTTCCTTGGACCTACTGGTGTTGGTAAGACAGAGTTGGCCAAGGCT
TTGGCGGAAGTTCTCTTTGATGATGAGTCAGCTTTGCTTCGCTTTGACATGTCAGAATACATGGAAAAATTTGCGGCTAG
CCGCCTTAATGGTGCTCCTCCAGGTTATGTTGGATATGATGAGGGTGGTGAATTAACAGAGAAAGTTCGCAATAAGCCTT
ACTCAGTTCTCCTCTTTGACGAGGTGGAAAAGGCTCACCCAGATATTTTCAACATCCTCTTACAGGTTTTGGATGATGGT
GTCTTGACGGATAGTCGAGGTCGTAAAGTCGATTTCTCAAATACCATTATCATTATGACTTCGAACTTGGGAGCGACTGC
TCTTCGTGATGATAAGACTATTGGATTTGGTGCCCAAGACATTTCTCATAATCACCAAGCAATGCAGTCACGTATCATGG
AAGAACTTAAGAAGGCCTACCGTCCAGAGTTTATCAACCGTATTGATGAGAAGGTTGTCTTCCATAGTCTAGAGGAAGAG
CAACTTCGTGAGATTGTCAAGATTATGATGAAACCGTTGGTATCAGCTTTGGCTGAAAAAGGGATTGACTTGAAATTCCA
ACCAGCTGCTCTCAAGCATTTAGCTAAAGATGGCTATGATGTTGAGATGGGTGCTCGTCCATTACGTCGCACGATTCAAA
CTCAAGTGGAGGACAAGTTATCTGAGCTCTTACTAGGTGGTCAAGTAGTTAGTGGACAAACTCTTAAAATCGGCTGCTCG
AAAGATAAATTAACCTTTACAGTAGTGTAA

Protein sequence :
MQAIFHRAQLEAERFGSPFLETWHVLLAMVEVPGSVAYLTFTDFEDRIRAEEIETAAVLAMEKSPKDLSESDIIDLRAQS
HALEVMLQEAEGIASVTGAVEVGSEHVLMAFLLHKDLMVCRLLEVAGFQYKDDSDKPRIIDLRRSLERYAGLSKQDLKAI
HDLRKPKKSKASGNFANMMQPPQSSTGELSDYTKDLTAVAELDALDPVIGREKEISRMIQVLSRKTKNNPVLVGEAGVGK
TALALGLAQRIASGEVPFELADMRILELDMMSVVAGTRFRGDFEERMNQIIDEIEADGKIILFIDELHTIIGSGSGIDST
LDAANILKPALARGTLHMVGATTQAEYQKHIEKDAALSRRFAKITIEEPSVAEAIDILKGLRSSYEDYHRVTITDEAVET
AVKAAHRYLTSKNLPDSAIDLLDEASATVQGRIKKEAKREITPLDEALLSGDMKAAVKQYKASQKAKLPEPALVDADQIM
QTLSRLSGIPVEKMTQADSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALLRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNILLQVLDDG
VLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTIGFGAQDISHNHQAMQSRIMEELKKAYRPEFINRIDEKVVFHSLEEE
QLREIVKIMMKPLVSALAEKGIDLKFQPAALKHLAKDGYDVEMGARPLRRTIQTQVEDKLSELLLGGQVVSGQTLKIGCS
KDKLTFTVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-152 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpC YP_006069170.1 chaperone protein ClpB VFG0079 Protein 8e-171 54
clpC YP_006069170.1 chaperone protein ClpB VFG0080 Protein 1e-136 45