Gene Information

Name : vicR (Ssal_01221)
Accession : YP_006068378.1
Strain : Streptococcus salivarius 57.I
Genome accession: NC_017594
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1210720 - 1211427 bp
Length : 708 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAAATTCTAGTAGTTGATGATGAAAGACCAATCTCGGATATCATCAAGTTTAATCTGACTAAAGAGGGTTATGA
AGTTGTTACGGCGTTTGATGGTCGTGAAGCTTTAGAGCAGTTTGAAGTTGAAAAACCAGACTTGGTCATCCTGGACTTGA
TGTTGCCTGAACTAGATGGCTTAGAAGTTGCTAAGGAAATTCGAAAGACAAGTCACACACCAATTATCATGCTTTCCGCT
AAGGATAGCGAGTTCGATAAGGTTATCGGGCTAGAAATTGGGGCGGACGACTATGTGACGAAACCATTTTCTAATCGTGA
ATTGTTGGCACGTATCAAAGCTCACTTGCGTCGTACAGAGACTATTGAAACAGCATCAGAAGAAAGCTCTAACTCTGGTA
AGCAGGAGATTTCAATTGGTGAGTTGATAATTGTTCCAGATGCGTTTGTTGCTAAAAAACGTGGAAATGAAGTCGAGCTC
ACACACCGTGAATTTGAGTTGCTTTTCCATCTGGCAACTCACATGGGACAAGTGATGACGCGTGAGCATTTACTTGAAAC
TGTTTGGGGTTATGACTATTTTGGTGATGTTCGTACGGTTGACGTAACCATTCGTCGTCTCCGTGAAAAAATTGAAGATA
CACCTAGTCGTCCTGAATATATTTTGACGCGTCGTGGTGTTGGTTATTATATGAAGAATTATGACTAG

Protein sequence :
MKKILVVDDERPISDIIKFNLTKEGYEVVTAFDGREALEQFEVEKPDLVILDLMLPELDGLEVAKEIRKTSHTPIIMLSA
KDSEFDKVIGLEIGADDYVTKPFSNRELLARIKAHLRRTETIETASEESSNSGKQEISIGELIIVPDAFVAKKRGNEVEL
THREFELLFHLATHMGQVMTREHLLETVWGYDYFGDVRTVDVTIRRLREKIEDTPSRPEYILTRRGVGYYMKNYD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-35 44
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vicR YP_006068378.1 transcriptional regulator NC_012469.1.7685629. Protein 1e-86 80
vicR YP_006068378.1 transcriptional regulator HE999704.1.gene2815. Protein 2e-52 55
vicR YP_006068378.1 transcriptional regulator NC_002952.2859905.p0 Protein 5e-53 53
vicR YP_006068378.1 transcriptional regulator NC_002951.3237708.p0 Protein 3e-53 53
vicR YP_006068378.1 transcriptional regulator NC_007622.3794472.p0 Protein 5e-53 53
vicR YP_006068378.1 transcriptional regulator NC_003923.1003749.p0 Protein 3e-53 53
vicR YP_006068378.1 transcriptional regulator NC_002758.1121668.p0 Protein 3e-53 53
vicR YP_006068378.1 transcriptional regulator NC_009641.5332272.p0 Protein 3e-53 53
vicR YP_006068378.1 transcriptional regulator NC_013450.8614421.p0 Protein 3e-53 53
vicR YP_006068378.1 transcriptional regulator NC_007793.3914279.p0 Protein 3e-53 53
vicR YP_006068378.1 transcriptional regulator NC_002745.1124361.p0 Protein 3e-53 53
vicR YP_006068378.1 transcriptional regulator NC_009782.5559369.p0 Protein 3e-53 53
vicR YP_006068378.1 transcriptional regulator AE016830.1.gene1681. Protein 2e-46 49
vicR YP_006068378.1 transcriptional regulator NC_012469.1.7686381. Protein 2e-43 49
vicR YP_006068378.1 transcriptional regulator AM180355.1.gene1830. Protein 8e-40 45
vicR YP_006068378.1 transcriptional regulator AE015929.1.gene1106. Protein 4e-36 44
vicR YP_006068378.1 transcriptional regulator NC_013450.8614146.p0 Protein 5e-40 43
vicR YP_006068378.1 transcriptional regulator NC_002951.3238224.p0 Protein 5e-40 43
vicR YP_006068378.1 transcriptional regulator NC_007793.3914065.p0 Protein 5e-40 43
vicR YP_006068378.1 transcriptional regulator NC_002758.1121390.p0 Protein 5e-40 43
vicR YP_006068378.1 transcriptional regulator NC_010079.5776364.p0 Protein 5e-40 43
vicR YP_006068378.1 transcriptional regulator NC_002952.2859858.p0 Protein 5e-40 43
vicR YP_006068378.1 transcriptional regulator NC_007622.3794948.p0 Protein 5e-40 43
vicR YP_006068378.1 transcriptional regulator NC_003923.1003417.p0 Protein 5e-40 43
vicR YP_006068378.1 transcriptional regulator CP001138.1.gene4273. Protein 5e-31 43
vicR YP_006068378.1 transcriptional regulator AF155139.2.orf0.gene Protein 7e-40 43
vicR YP_006068378.1 transcriptional regulator FJ349556.1.orf0.gene Protein 9e-41 43
vicR YP_006068378.1 transcriptional regulator DQ212986.1.gene4.p01 Protein 1e-37 43
vicR YP_006068378.1 transcriptional regulator BAC0533 Protein 2e-31 42
vicR YP_006068378.1 transcriptional regulator NC_002695.1.915041.p Protein 9e-32 42
vicR YP_006068378.1 transcriptional regulator CP000647.1.gene4257. Protein 2e-31 42
vicR YP_006068378.1 transcriptional regulator CP000034.1.gene3834. Protein 9e-32 42
vicR YP_006068378.1 transcriptional regulator NC_005054.2598277.p0 Protein 1e-37 42
vicR YP_006068378.1 transcriptional regulator NC_014475.1.orf0.gen Protein 1e-37 42
vicR YP_006068378.1 transcriptional regulator AF162694.1.orf4.gene Protein 3e-35 42
vicR YP_006068378.1 transcriptional regulator HE999704.1.gene1528. Protein 6e-35 41
vicR YP_006068378.1 transcriptional regulator CP004022.1.gene3215. Protein 3e-33 41
vicR YP_006068378.1 transcriptional regulator CP001918.1.gene5135. Protein 5e-26 41
vicR YP_006068378.1 transcriptional regulator AE000516.2.gene3505. Protein 8e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vicR YP_006068378.1 transcriptional regulator VFG1563 Protein 2e-35 44
vicR YP_006068378.1 transcriptional regulator VFG1702 Protein 2e-35 43
vicR YP_006068378.1 transcriptional regulator VFG1389 Protein 4e-32 43